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Lately I find it convenient to build Debian packages in containers. I found Apptainer to be the most convenient for me. Since Apptainer container definition files are not much different from Docker on…
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### Is there an existing issue for this?
- [X] I have searched the existing issues
### Is your feature request related to a problem? Please describe.
Several of the environments I would like …
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Hi,
I want to use it in the singularity containers but when I use the demand like:
```
singularity pull docker://pyprophet/pyprophet:2.1.3
```
It is not working. Do you know the correct cod…
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Seqera Containers is a new service to provide Docker + Singularity containers from any Conda / PyPI packages. Images are generated on demand and can include multiple packages.
Links for background:…
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Hello,
I'm having some trouble running stamp preprocess. I am just testing it on one .svs file right now.
Below is the script I wrote for sbatch submission using SLURM:
```
#!/bin/bash
#SBA…
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### Have you checked the docs?
- [X] [nf-core website: troubleshooting](https://nf-co.re/usage/troubleshooting)
- [X] [nf-core modules documentation](https://nf-co.re/docs/contributing/modules)
### …
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** Rstudio Server in Singularity **
*** A wiki entrance explaining how to download and setup a Singularity container for R dev. (Rstudio server / Shiny server / other R stuff) in the cluster. ***
I…
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zDB fails due to a missing module when run with the following option :
zdb webapp --debug --dev_server
File "/usr/local/lib/python3.9/threading.py", line 980, in _bootstrap_inner
self.ru…
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https://seqera.io/containers/
With this absolutely amazing resource you can specify what type of container you want to create (at the moment either Docker or Singularity) and what packages you want…
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The current implementation of using singularity containers performs the environment setup outside of the container. I think in most cases, the environment would be installed within the container, and …