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I do see some Docker Hub LIRICAL options (https://hub.docker.com/search?q=lirical) but I was wondering if there are any recommended ones for LIRICAL with Exomiser as I need to turn a docker into a sin…
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**Have you checked the FAQ? https://github.com/google/deepvariant/blob/r1.6.1/docs/FAQ.md**:
Yes
**Describe the issue:**
I can't pull the container using singularity.
**Setup**
- Operating …
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hey @moleconet ! I wanted to give you a heads up your build triggered an error, a pretty silly one actually :)
![image](https://user-images.githubusercontent.com/814322/32401426-2e639338-c0cb-11e7-…
vsoch updated
6 years ago
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Hi @geraldinepascal,
I’m excited to use the FROGS workflow v5, but I’ve encountered several issues during installation and running the workflow on my laptop (local machine) and a SLURM server usin…
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**Describe the bug**
When I build a singularity container from the docker hub recipe file provided at docker://pinellolab/crispresso2
```
apptainer build --fakeroot crispresso2_latest.sif docker://…
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Hi, I am running the latest cnvkit image on the docker hub.
I get spurious calls where many reads with mapq = 0. I tried cnvkit.py coverage with the -q option, but it does not do anything. Is this a …
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The build is working fine, the issue is that you have a folder called "Singularity" in the base of your repository, and this is being mistaken by the builder for the recipe file (and it's going into a…
vsoch updated
6 years ago
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It's gone, so we should remove that code. Hopefully we replace these usages with ReproNim/containers?
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hey @tin6150 ! I saw that you were testing Singularity Hub 2.0 (thank you!) and wanted to get your feedback, experience. For example, I don't see any "Singularity" files in your repo, and it seems tha…
vsoch updated
6 years ago
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Since singularity seems to be the leading virtualization technique for high-performance planning, and since the original hub has been discontinued, it's probably worth our while to have a community-le…