-
### Description of feature
Hello, thanks for the great work with this pipeline. I would like to try to use this pipeline to call somatic mutations in single cell rna-seq data. I have my own WGS refer…
-
In the context of somatic mutations there is no easy way to represent a genotype in the same way as in germline variants. For this reason, some somatic mutation callers, do not provide genotype inform…
-
Hello,
Any tutorial on paired normal-tumor somatic mutation calling?
Thanks
Jim
-
Hi! Dr. Dou,
Thank you for developing this great software Monopogen for both germline and somatic SNVs detection in single-cell sequencing data. We found it very efficient in somatic mutations call…
-
Hi,
we want to analyze somatic mutations on ONT short reads (300-500bps).
You are filtering and removing variants that are close (100bp?, reported qual set to 0, filter: LowQual;ReadStartEnd)
to s…
-
A recent Nature [article](http://www.nature.com/nature/journal/vaop/ncurrent/full/nature16965.html) on pancreatic cancer sequenced 382 patients from the Australian Pancreatic Cancer Genome Initiative …
-
[Placeholder for implementing a tier based ranking for somatic mutation]
---
### Resources
Resources needed to be able to understand and implement a tier based ranking
#### Publications
What …
-
A1BG_cross = ov.multi_join({"umich proteomics": "A1BG", "bcm transcriptomics": "A1BG"})
Trace
AttributeError Traceback (most recent call last)
Cell In[17], [line 1](vsc…
-
**Käsitteen tyyppi**
CONCEPT
**Ehdotettu termi suomeksi**
somaattiset mutaatiot
**Ehdotettu termi ruotsiksi**
**Ehdotettu termi englanniksi**
somatic mutations
**Tarkoitusta täsmentävä selit…
-