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AWGL
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somatic_db
A database for analysing cancer NGS data within AWMGS
https://awgl.github.io/somatic_db/
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v1.5.1 release
#141
erikwaskiewicz
closed
2 hours ago
0
docs: Correct poly lists command in quick_install.md and incorrect links in README
#140
avirsaha
opened
1 week ago
0
Incorrect links in Readme
#139
PatrickWeller
opened
1 week ago
0
Install guide instructions for poly lists
#138
PatrickWeller
opened
1 week ago
0
Swgs
#137
Istaisa
closed
11 hours ago
3
Resync dev with main
#136
erikwaskiewicz
closed
3 weeks ago
0
Deploy v1.5.0
#135
erikwaskiewicz
closed
3 weeks ago
0
Resetting Checks Not fully resetting
#134
millardkieron
opened
1 month ago
0
Skeleton Structure for All Data Display in SWGS
#133
Istaisa
opened
1 month ago
0
SNV Tiering for SWGS
#132
Istaisa
opened
1 month ago
0
Temporary CSV download for SWGS
#131
Istaisa
closed
3 weeks ago
1
Initial SWGS models and upload
#130
Istaisa
closed
3 weeks ago
2
Upload for Somatic WGS
#129
Istaisa
closed
2 weeks ago
0
Bioinformatics QC page & simplfy analysis finalise
#128
erikwaskiewicz
opened
2 months ago
3
Whole run coverage tsv
#127
niamhat
closed
3 weeks ago
1
Resync dev
#126
erikwaskiewicz
closed
2 months ago
0
Deploy v1.4.4
#125
erikwaskiewicz
closed
2 months ago
0
Update changelog
#124
erikwaskiewicz
closed
2 months ago
0
Pull request template2
#123
Istaisa
closed
2 months ago
0
IGV settings sanity check
#122
erikwaskiewicz
closed
2 months ago
1
Use messages framework for error/ success messages
#121
erikwaskiewicz
opened
2 months ago
0
Scientist suggestion - IGV settings sanity check
#120
erikwaskiewicz
closed
2 months ago
1
Docs folder
#119
erikwaskiewicz
closed
2 months ago
0
add changelog
#118
Istaisa
closed
2 months ago
1
More LIMS updates
#117
erikwaskiewicz
opened
4 months ago
2
Development
#116
erikwaskiewicz
closed
5 months ago
0
Live database is very slow
#115
erikwaskiewicz
closed
2 months ago
2
Turn off num pending ajax
#114
erikwaskiewicz
closed
5 months ago
0
Variants first checked before adding to artefact list stop cases closing
#113
Istaisa
opened
5 months ago
0
resync main into dev
#112
erikwaskiewicz
closed
5 months ago
0
Upload script should raise error for BEDtools warnings
#111
Istaisa
opened
5 months ago
0
Coverage summary CSV for whole worksheet
#110
erikwaskiewicz
closed
3 weeks ago
1
Development
#109
SophieS9
closed
6 months ago
0
Manual variant validation
#108
Istaisa
closed
6 months ago
1
Scientist Suggestion - "Audit" of own checks
#107
SophieS9
opened
6 months ago
1
Edit manual variant form validation to include some padding around ROI
#106
Istaisa
closed
6 months ago
0
Deploy v1.4.1
#105
erikwaskiewicz
closed
7 months ago
0
added transcript back to gaps for report
#104
Istaisa
closed
7 months ago
0
Gene name missing for gaps from report download
#103
millardkieron
closed
7 months ago
0
Deploy v1.4.0
#102
erikwaskiewicz
closed
7 months ago
0
Idh1
#101
niamhat
closed
5 months ago
1
LMS XML updates
#100
erikwaskiewicz
closed
7 months ago
0
Unit test for fusion upload and formatting
#99
niamhat
closed
7 months ago
1
Issue 92
#98
erikwaskiewicz
closed
7 months ago
2
sanitise fusion name input
#97
Istaisa
closed
7 months ago
0
Illumina fusion naming can lead to multiple fusions with same breakpoints
#96
Istaisa
closed
7 months ago
1
Order the fusion check objects
#95
erikwaskiewicz
closed
7 months ago
1
edited lims initials form
#94
Istaisa
closed
7 months ago
2
added manual fusion form
#93
Istaisa
closed
7 months ago
1
Manual variants added multiple times if page reloaded
#92
Istaisa
closed
7 months ago
2
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