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AlexsLemonade
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OpenScPCA-analysis
An open, collaborative project to analyze data from the Single-cell Pediatric Cancer Atlas (ScPCA) Portal
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Initialize clustering utility module
#729
sjspielman
closed
2 months ago
1
Update code styling workflow
#728
sjspielman
closed
2 months ago
8
724 Update simulation scripts to handle new data formats
#725
jashapiro
closed
2 months ago
0
Update simulation scripts to handle new data formats
#724
jashapiro
closed
2 months ago
0
Add some words to dictionary
#721
sjspielman
closed
3 months ago
1
Don't have spellcheck action fail
#720
jashapiro
closed
3 months ago
2
Monthly spellcheck results
#719
github-actions[bot]
closed
3 months ago
3
revert cell-type-ewings conda-lock
#718
jashapiro
closed
3 months ago
0
Allow increased space for docker build/push
#717
jashapiro
closed
2 months ago
0
Custom function in ipynb should talk about AnnData
#715
jaclyn-taroni
closed
2 months ago
2
Remove defaults channel from all modules and templates
#714
jashapiro
closed
3 months ago
1
Update GitHub actions to use miniforge
#713
jashapiro
closed
2 months ago
0
Update documentation to remove `defaults` channel and suggest miniforge
#712
jashapiro
closed
2 months ago
0
Update and test R/conda combined images with miniforge
#711
jashapiro
closed
2 months ago
0
Update existing conda environments and templates to remove `defaults` channel
#710
jashapiro
closed
3 months ago
0
Style code on a per module basis
#708
jaclyn-taroni
closed
2 months ago
0
Update periodic release issue template to minimize steps
#707
jaclyn-taroni
closed
3 months ago
0
Adding 00-reference to build azimuth kidney reference
#706
maud-p
closed
2 months ago
25
Update conda settings/instructions to avoid potential licensing issues
#705
jashapiro
closed
2 months ago
1
SCPCP000006 - Add 01-clustering template analysis
#704
maud-p
closed
2 months ago
12
Wilms-06: Download and build the Azimuth compatible fetl kidney reference
#703
maud-p
closed
1 month ago
4
Fix some bullet spacing
#702
sjspielman
closed
3 months ago
0
DSRCT Dataset Analysis (SCPCP000013) #583
#701
danhtruong
opened
3 months ago
1
Fix docs spacing
#700
sjspielman
closed
3 months ago
1
01 clustering wilms 06
#699
maud-p
closed
3 months ago
3
GHA: Automated analysis module code styling
#698
github-actions[bot]
closed
3 months ago
2
Style code for periodic releases
#697
sjspielman
closed
3 months ago
2
Disable second docker build summary
#695
allyhawkins
closed
3 months ago
0
Add Rosetta to Docker installation instructions
#694
sjspielman
closed
3 months ago
3
Add template to evaluate clustering to Ewing cell typing
#693
allyhawkins
closed
3 months ago
2
Work around disk space limits for building Docker images
#692
allyhawkins
closed
3 months ago
0
Monthly spellcheck results
#691
github-actions[bot]
closed
3 months ago
4
Test for building Ewing Docker image
#690
allyhawkins
closed
3 months ago
1
Update docker setup instructions for Mac
#689
sjspielman
closed
3 months ago
0
Add push trigger to Wilms tumor cell typing Docker build/push workflow & proposed change to template
#688
jaclyn-taroni
closed
3 months ago
1
Cell Type Annotation of Osteosarcoma snRNA-seq Data (SCPCP000017)
#687
yutarohtanaka
opened
3 months ago
1
Workflow for clustering cells in SCPCP000015
#686
allyhawkins
opened
3 months ago
0
Create template notebook to use for evaluating clusters in SCPCP000015
#685
allyhawkins
closed
3 months ago
0
Assign clusters to SCPCL000822 and SCPCL000824
#683
allyhawkins
closed
3 months ago
3
Start wilms analysis
#681
maud-p
closed
3 months ago
3
01_clustering
#680
maud-p
closed
3 months ago
1
Wilms Tumor Dataset Annotation (SCPCP000006) _ clustering
#679
maud-p
closed
1 month ago
1
Create a release: 2024-08-01
#678
github-actions[bot]
closed
3 months ago
5
Discussion: Module testing GHA path updates
#676
sjspielman
closed
2 months ago
1
Add zellkonverter step to doublets Dockerfile
#675
sjspielman
closed
3 months ago
0
Update CODEOWNERS
#674
jaclyn-taroni
closed
3 months ago
0
Update CODEOWNERS
#673
jaclyn-taroni
closed
3 months ago
0
Metadata file: compilation of a metadata file of marker genes for expected cell types that will be used for validation at a later step
#672
maud-p
closed
3 months ago
6
Wilms Tumor Dataset Annotation (SCPCP000006) #635
#671
maud-p
opened
3 months ago
2
Add metacells to GHA and handle small data
#670
jashapiro
closed
3 months ago
1
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