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AlexsLemonade
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scpca-docs
User information about ScPCA processing
https://scpca.readthedocs.io/en/latest/
BSD 3-Clause "New" or "Revised" License
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Merge changes containing docs on `processed.rds` files to `main`
#105
allyhawkins
closed
1 year ago
0
Merge docs reflecting `_processed.rds` data to `main`
#104
jaclyn-taroni
closed
1 year ago
0
Add cautions about processed data
#103
jashapiro
closed
1 year ago
0
Update Seurat conversion with scpcaTools function
#102
sjspielman
opened
1 year ago
0
Update getting started section to include mention of processed objects
#101
allyhawkins
closed
1 year ago
1
Update SCE file contents to include processed SCE objects
#100
allyhawkins
closed
1 year ago
2
Include processed RDS file in download files description
#99
allyhawkins
closed
1 year ago
0
Update getting started section to include processed.rds file
#98
allyhawkins
closed
1 year ago
1
Include section on post processing of gene expression data in processing information part of docs
#97
allyhawkins
closed
1 year ago
1
Create a development branch for documenting in progress changes
#96
allyhawkins
closed
1 year ago
0
Update project and sample download files illustrations to include `_processed.rds` file
#95
allyhawkins
closed
1 year ago
4
Update download files content to include `_processed.rds` file
#94
allyhawkins
closed
1 year ago
1
Document contents for filtered and normalized SCE objects
#93
allyhawkins
closed
1 year ago
1
Misc doc fixes
#92
sjspielman
closed
2 years ago
1
Add link to downstream analyses repo
#91
allyhawkins
closed
2 years ago
0
Add processing information for normalization and UMAP
#90
jashapiro
closed
1 year ago
2
Multiplexed Data Available
#89
davidsmejia
closed
2 years ago
0
Link to scpca-downstream-analyses in getting started section
#88
allyhawkins
closed
2 years ago
0
Add information about multiplex samples to download section
#87
jashapiro
closed
2 years ago
1
Add illustration for spatial download to docs
#86
allyhawkins
closed
2 years ago
0
Getting started section for multiplexed samples
#85
allyhawkins
closed
2 years ago
1
Update references for genetic demux
#84
jashapiro
closed
2 years ago
0
Addition of Multiplex FAQs
#83
allyhawkins
closed
2 years ago
2
Add information about multiplex samples to download section
#82
allyhawkins
closed
2 years ago
1
Remove Data will be available line
#81
davidsmejia
closed
2 years ago
1
remove trailing whitespace
#80
davidsmejia
closed
2 years ago
0
pinning jinga<3.1.0
#79
davidsmejia
closed
2 years ago
0
Fix Builds
#78
davidsmejia
closed
2 years ago
0
FAQ: What is a multiplexed sample?
#77
jaclyn-taroni
closed
2 years ago
0
FAQ: Why do multiplexed samples have est. demux counts?
#76
jaclyn-taroni
closed
2 years ago
1
Document download structure for multiplex samples
#75
jaclyn-taroni
closed
2 years ago
7
Getting started with multiplexed samples
#74
jaclyn-taroni
closed
2 years ago
1
FAQ: What are est. demux cell counts?
#73
jaclyn-taroni
closed
2 years ago
1
Builds are failing
#72
davidsmejia
closed
2 years ago
0
Update spatial download information to indicate spatial files will be separate
#71
allyhawkins
closed
2 years ago
0
Add multiplex file docs
#70
jashapiro
closed
2 years ago
2
Add metadata.json file to description of spatial outputs
#69
allyhawkins
closed
2 years ago
1
Add illustration of spatial download folder for an individual sample
#68
allyhawkins
closed
2 years ago
4
Update download files section to reflect that spatial libraries and single-cell will be separate downloads
#67
allyhawkins
closed
2 years ago
0
Add description of spatial files to download files section
#66
allyhawkins
closed
2 years ago
1
Remove data available soon from bulk RNA-seq processing section
#65
allyhawkins
closed
2 years ago
0
Add documentation for demultiplexing process
#64
jashapiro
closed
2 years ago
0
Remove "data available soon" when spatial data becomes available on the portal
#63
allyhawkins
closed
2 years ago
5
Remove "data available soon" from bulk RNA-seq processing information
#62
allyhawkins
closed
2 years ago
0
#60 - add hotjar script
#61
nozomione
closed
2 years ago
0
Add Hotjar form to docs
#60
davidsmejia
closed
2 years ago
0
Create a getting started with scpca data section
#59
allyhawkins
closed
2 years ago
2
Update illustrations for download files
#58
allyhawkins
closed
2 years ago
0
Update screenshots in download section to reflect name change of libraries_metadata.tsv to single_cell_metadata.tsv
#57
allyhawkins
closed
2 years ago
3
Add bulk metadata file to download section
#56
allyhawkins
closed
2 years ago
2
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