BGI-flexlab SOAPnuke issues

BGI-flexlab / SOAPnuke

A Tool for integrated Quality Control and Preprocessing on FASTQ or BAM/CRAM files

GNU General Public License v3.0

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issues

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合并gz测序文件并过滤问题

#69 fallinwind opened 2 months ago
1
fix: the code that 2.1.9 bring in can't be compied by gcc13

#68 starsareintherose opened 6 months ago
0
使用SAOPnuke处理小鼠测序数据的参数问题

#67 Fzwwww opened 6 months ago
1
demo config file

#66 huangl07 opened 6 months ago
2
SOAPnuke.2.2.6 -L参数用法

#65 anshrly closed 2 months ago
3
fix: gcc13

#64 starsareintherose closed 6 months ago
1
fix: error: ‘uint64_t’ 'uint32_t' were not declared in this scope

#63 starsareintherose closed 11 months ago
0
Problem with bowtie2

#62 ozambadam opened 1 year ago
0
NO module filterStLFR in the conda version

#61 ysevel opened 2 years ago
0
-l and -q

#60 walkoface closed 2 years ago
1
"seqType" and "qualSys" can't use

#59 uso2015 closed 2 years ago
1
make error-undefined reference

#58 pynie1 closed 2 years ago
1
make ERROR

#57 qymeng1996 closed 2 years ago
1
processHts.cp

#56 miaoyu01 closed 3 years ago
0
make Error

#55 songdq closed 2 years ago
5
Does SOAPnuke 2 not remove PCR duplications？

#54 MGI-tech-bioinformatics opened 4 years ago
1
Segmentation fault (core dumped)

#53 moldach closed 2 years ago
5
fix build

#52 alienzj opened 4 years ago
4
fqcheck dose not exists

#51 lifan18 closed 3 years ago
2
Analysis MinION data using SOAPnuke

#50 sekhwal opened 4 years ago
0
Recommended htslib version

#49 carlosmag closed 2 years ago
1
Statistics error

#48 Myskiper closed 4 years ago
1
Occur Segmentation fault (core dumped)

#47 sjlgg closed 4 years ago
4
Bug：关于SOAPnuke filter参数-t

#46 vanessayang0927 closed 4 years ago
1
Install using conda

#45 iromeo opened 4 years ago
2
Duplicates Count

#44 YuhaoDoong closed 5 years ago
0
parameters

#43 HuaZou closed 5 years ago
3
疑问：关于SOAPnuke 2.0 -J参数

#42 AmericanoAndAlcohol closed 5 years ago
8
质量值参数

#41 huangzhibo closed 5 years ago
1
-o参数

#40 huangzhibo closed 5 years ago
1
split clean fastq

#39 huangzhibo closed 5 years ago
1
The return value is false when command finished

#38 YingYa closed 5 years ago
1
SOAPnuke filter error

#37 dulunar closed 5 years ago
1
Make error in SOAPnuke2.

#36 SeanZhi closed 5 years ago
1
Bug fixed

#35 youngchan919 closed 6 years ago
0
make error in 2.X

#34 lskfs closed 5 years ago
1
bug fixed

#33 youngchan919 closed 6 years ago
0
2.0 beta

#32 youngchan919 closed 6 years ago
0
SOAPnuke make failed

#31 xianxiongma closed 5 years ago
3
number of filted reads is wrong

#30 lituan closed 5 years ago
1
Chenyuxin

#29 youngchan919 closed 6 years ago
0
Chenyuxin

#28 youngchan919 closed 6 years ago
0
Parameters "-d" and "-7 1" are in conflict in "filter" command

#27 Yanpengxu closed 5 years ago
1
Change to No CutAdapter

#26 youngchan919 closed 6 years ago
0
Add lowQual Num Filter to sRNA

#25 youngchan919 closed 6 years ago
0
1.6.4

#24 youngchan919 closed 6 years ago
0
Merge branch 'master' into chenyuxin

#23 youngchan919 closed 6 years ago
0
Chenyuxin

#22 youngchan919 closed 6 years ago
0
Bug fixed and function added

#21 youngchan919 closed 6 years ago
0
install problem

#20 yaruchen closed 5 years ago
1