BasisResearch collab-creatures issues

BasisResearch / collab-creatures

Analyzing animal collaboration with Bayesian and causal inference.

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Notebook to test existing Collab functions on fish data

#81 PalkaPuri closed 15 hours ago
1
Import fish data for velocity calculations

#80 PalkaPuri opened 6 days ago
1
add recent version

#79 rfl-urbaniak closed 6 days ago
0
staging velocity

#78 rfl-urbaniak opened 6 days ago
0
It may make sense to smooth the velocity in time

#77 rfl-urbaniak opened 1 week ago
0
derive velocity predictors

#76 rfl-urbaniak closed 6 days ago
1
communicators_inference.ipynb needs textual content

#75 rfl-urbaniak opened 1 month ago
0
keep `how_far` prior to squaring in derivedDF, to expand modelling experiments

#74 rfl-urbaniak opened 1 month ago
0
filter other foragers by visibility

#73 rfl-urbaniak closed 6 days ago
0
add_velocity_to_foragers

#72 rfl-urbaniak closed 1 week ago
3
remove long computations from automatic notebook testing

#71 rfl-urbaniak closed 1 month ago
1
time labels in plots for locust ds are inconsistent

#70 rfl-urbaniak opened 1 month ago
0
making a db class notebook shorter

#69 rfl-urbaniak closed 1 month ago
2
Elm locust notebook

#68 emackev closed 2 months ago
7
ensure NA handling is clear and explain how nans arise

#67 rfl-urbaniak opened 3 months ago
1
Adding documentation to rhf notebook

#66 emackev closed 3 months ago
11
delete vscode folder

#65 rfl-urbaniak closed 4 months ago
0
revised staging foraing to avoid nbval configuration errors

#64 rfl-urbaniak closed 4 months ago
1
fixing online check failures

#63 rfl-urbaniak closed 4 months ago
0
fix future warning

#62 rfl-urbaniak opened 4 months ago
1
make the locust ds class example shorter.

#61 rfl-urbaniak opened 4 months ago
3
facilitate use of own data with ds

#60 rfl-urbaniak opened 4 months ago
0
add repo readme.rst

#59 rfl-urbaniak closed 4 months ago
0
dynamical system modelling for foraging locust

#58 rfl-urbaniak closed 4 months ago
1
dynamical systems modelling for locust data

#57 rfl-urbaniak closed 4 months ago
1
add communicators inference notebook

#56 rfl-urbaniak closed 4 months ago
0
communicator simulations yield reward and forager locs of different lengths (rewards miss one)

#55 rfl-urbaniak opened 4 months ago
0
build derived predictors visualisation method from `locust_approximate_pipeline.ipynb` into the toolkit

#54 rfl-urbaniak closed 3 months ago
0
add text to rhf pipeline notebook

#53 rfl-urbaniak closed 1 month ago
2
add text to locust approximate pipeline

#52 rfl-urbaniak opened 4 months ago
0
reach out to the locust paper authors

#51 rfl-urbaniak opened 4 months ago
0
Ru central park birds inference refactored

#50 rfl-urbaniak closed 4 months ago
1
integrate and refactor functions from `central-park-birds` module

#49 rfl-urbaniak closed 3 months ago
0
add data prep and visualisation notebook for the central parks birds

#48 rfl-urbaniak closed 4 months ago
4
refactor the locust notebook to use `distances_and_peaks` as in `central-park-...`

#47 rfl-urbaniak closed 3 months ago
0
ensure that central park figures are generated as in paper

#46 rfl-urbaniak opened 6 months ago
0
ensure locust figures are generated as in paper

#45 rfl-urbaniak opened 6 months ago
0
ensure rhf figures are generated as in paper

#44 rfl-urbaniak opened 6 months ago
0
ensure communicator figures are generated as in paper

#43 rfl-urbaniak opened 6 months ago
0
refactor code needed to make `random-hungry-followers.ipynb` run.

#42 rfl-urbaniak closed 4 months ago
2
fix indexing in `add_follower_foragers`

#41 rfl-urbaniak closed 3 months ago
0
add range independently from visibility, esp. in locust, check r^2

#40 rfl-urbaniak opened 6 months ago
0
added the locust pipeline notebooks

#39 rfl-urbaniak closed 4 months ago
3
decrease forager icons in `animate_foragers`

#38 rfl-urbaniak opened 6 months ago
0
replace the code in `visualise_forager_predictors` with the one exemplified in `locust_approximate_pipeline`

#37 rfl-urbaniak opened 6 months ago
0
added animations and automatic nb clean

#36 rfl-urbaniak closed 4 months ago
1
reinstate animations in `communicators_simulations` in `staging-foraging`

#35 rfl-urbaniak closed 4 months ago
1
cleaned up version of communicator birds code & notebooks

#34 rfl-urbaniak closed 6 months ago
0
clean up collab/foraging/communicators

#33 rfl-urbaniak closed 4 months ago
1
make sure requirements and extras are up to date

#32 rfl-urbaniak closed 3 months ago
0