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BlueBrain
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libsonata
A python and C++ interface to the SONATA format
https://libsonata.readthedocs.io/en/stable/
GNU Lesser General Public License v3.0
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simulation config: no default value for key `input: random_seed`
#269
WeinaJi
closed
1 year ago
3
Include Catch2 only if building tests
#268
alkino
closed
1 year ago
1
describe NodeSets handling in documentation
#267
mgeplf
closed
1 year ago
0
allow empty lists for `connection_overrides` in simulation config
#266
mgeplf
closed
1 year ago
2
nlohmann is_array() for empty arrays has type `null` instead of array
#265
mgeplf
closed
1 year ago
2
expose circuit config status
#264
edasubert
closed
1 year ago
0
switch to having `connection_overrides` being a list
#263
mgeplf
closed
1 year ago
8
Switch `connection_overrides` in config to be a list
#262
mgeplf
closed
1 year ago
11
Don't read the full node sets file before parsing
#261
mgeplf
closed
1 year ago
1
CircuitConfig.from_file may fail with generic RuntimeError and cause OOM
#260
GianlucaFicarelli
closed
1 year ago
3
Should empty node_set arrays be allowed
#259
mgeplf
closed
1 year ago
2
make explicit tests for edges with libraries
#258
mgeplf
closed
1 year ago
0
prep v0.1.18 release
#257
mgeplf
closed
1 year ago
0
Faster node sets
#256
mgeplf
closed
1 year ago
0
Multi clause nodeset
#255
mgeplf
closed
1 year ago
0
SONATA sim config: change the default file name for report
#254
WeinaJi
closed
1 year ago
2
update funding for SGA3
#253
mgeplf
closed
1 year ago
0
CircuitConfig: add access to the provenance information.
#252
matz-e
closed
1 year ago
1
Prepare for release
#251
mgeplf
closed
1 year ago
0
Spatial index
#250
mgeplf
closed
1 year ago
1
C++ API documentation not properly displayed
#249
1uc
closed
1 year ago
5
Add `include(Catch)` to CMakeLists.txt.
#248
1uc
closed
1 year ago
2
Enable setting the C++ standard.
#247
1uc
closed
1 year ago
1
Compile issue with GCC 11.2.0 in C++17 projects
#246
1uc
closed
1 year ago
2
SONATA sim config updates
#245
WeinaJi
closed
1 year ago
3
allow missing nodes/edges in partial config
#244
mgeplf
closed
1 year ago
1
How to effectively distinguish sonata file types
#243
jplanasc
opened
1 year ago
6
make `chemical` the default connection type
#242
mgeplf
closed
1 year ago
1
Allow for partial circuit configs
#241
mgeplf
closed
1 year ago
2
remove old code that wasn't needed
#240
mgeplf
closed
1 year ago
0
add check for duplicate populations
#239
mgeplf
closed
1 year ago
0
refactor python tests so they are not in a monolithic file
#238
mgeplf
closed
1 year ago
0
Default edge type is `"chemical_synapse"`.
#237
1uc
closed
1 year ago
0
No population_names when "populations" dict is missing.
#236
1uc
closed
1 year ago
2
Fix get_population_names in README.rst
#235
GianlucaFicarelli
closed
1 year ago
0
release notes for v0.1.16
#234
GianlucaFicarelli
closed
1 year ago
0
Handle empty selections in source_nodes and target_nodes
#233
GianlucaFicarelli
closed
1 year ago
1
Fix #226 for empty selections.
#232
matz-e
closed
1 year ago
2
release notes for v0.1.15
#231
mgeplf
closed
1 year ago
0
make h5 files available through PopulationProperties
#230
mgeplf
closed
1 year ago
2
Supported aliases for `"electrical"`.
#229
1uc
closed
1 year ago
3
SimulationConfig parser: add modifications properties in conditions section
#228
WeinaJi
closed
1 year ago
2
Updates on the SimulationConfig parser
#227
WeinaJi
closed
1 year ago
0
don't make many small reads via HighFive/hdf5
#226
mgeplf
closed
1 year ago
1
EdgePopulation.get_attribute with significant number of non-consecutive edge ids
#225
joni-herttuainen
opened
1 year ago
7
Parse `metadata` and `beta_features` sections in SimulationConfig
#224
WeinaJi
closed
1 year ago
1
Bump pybind11 from v2.5.0 to v2.10.0; supports python 3.11
#223
mgeplf
closed
2 years ago
0
fix report files not respecting the `output` path
#222
mgeplf
closed
2 years ago
1
Report.file_name returns full path
#221
joni-herttuainen
closed
2 years ago
5
Docs: Missing items in Python API
#220
joni-herttuainen
closed
4 months ago
2
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