BlueBrain neurodamus issues

BlueBrain / neurodamus

A BBP Simulation Control application for NEURON

https://neurodamus.readthedocs.io

Apache License 2.0

8 stars 7 forks source link

issues

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[BBPBGLIB-1059] Integrate Oren's gap junction compensation procedure into neurodamus

#195 WeinaJi opened 3 days ago
4
Fix the Python 3.12 version inconsistency in GitHub actions cache

#194 WeinaJi closed 1 week ago
6
Switch astrocyte mod file from mcd to cadifus.

#193 WeinaJi closed 1 week ago
15
Switch astrocyte mod file from mcd to cadifus.

#192 dkeller9 closed 1 week ago
5
Crash-test mode: Speed up synapse loading

#191 ferdonline opened 3 weeks ago
6
Crash test mode

#190 ferdonline opened 3 weeks ago
6
Have a pre-stdinit hook, to be used by replace_axon

#189 ferdonline closed 3 weeks ago
3
ChangeLog 3.6.0

#188 jorblancoa closed 3 weeks ago
1
[BBPBGLIB-975] Improved "signal" shot noise parameterization

#187 seirios closed 3 weeks ago
2
Improved "signal" shot noise parameterization

#186 jorblancoa closed 4 weeks ago
1
Fix empty buckets issues and introduce checks on distribution

#185 st4rl3ss opened 1 month ago
7
Change log 3.5.0

#184 WeinaJi closed 1 month ago
2
Update ngv test to use V10 emodels

#183 WeinaJi closed 1 month ago
1
[BBPBGLIB-1175] Handle deleted sections correctly

#182 WeinaJi closed 1 month ago
2
Read modifications list from libsonata API

#181 WeinaJi closed 1 month ago
6
[BBPBGLIB-975] Improved "signal" shot noise parameterization

#180 seirios closed 1 month ago
0
Change log 3.4.0

#179 WeinaJi closed 2 months ago
1
[BBPBGLIB-1167] Automatic balance loading and on-the-fly rebalance

#178 st4rl3ss closed 2 months ago
8
Remove VecStim to use the version in neurodamus-models

#177 WeinaJi closed 2 months ago
10
Optimize Dockerfile a bit

#176 matz-e closed 3 months ago
3
download neocortex mods from github repo

#175 WeinaJi opened 3 months ago
6
ChangeLog 3.3.0

#174 WeinaJi closed 3 months ago
1
Replay with NetCons in CoreNEURON as in NEURON

#173 WeinaJi closed 2 months ago
8
Trigger workflow when pushing to main

#172 WeinaJi closed 3 months ago
7
[BBPBGLIB-1152] Multi-cycle support for dry run estimate and instantiation

#171 st4rl3ss closed 2 months ago
20
Typo in a documentation image

#170 tristan0x opened 3 months ago
0
Accurate synapse counts in dry-run (respect src target)

#169 ferdonline closed 2 months ago
17
Avoid calling cleanup from destructor

#168 ferdonline closed 3 months ago
15
Fix record_spikes for load balancing

#167 WeinaJi closed 3 months ago
4
Cache dependent packages in GH actions workflow

#166 WeinaJi closed 3 months ago
38
[BBPBGLIB-1158] Add empirical mechanism to estimate simulation memory usage

#165 st4rl3ss closed 3 months ago
9
Tests with subprocess should capture streams

#164 ferdonline closed 3 months ago
6
ChangeLog 3.2.1

#163 WeinaJi closed 4 months ago
1
[BBPBGLIB-1141] Remove HDF5reader.mod which is already replaced by libsonata

#162 WeinaJi closed 3 months ago
6
[BBPBGLIB-1154] Add information about CORENEURONLIB in the Docker README

#161 WeinaJi closed 4 months ago
6
Fix dead link from CONTRIBUTING.md to README.rst

#160 kbvw closed 4 months ago
4
[BBPBGLIB-1153] Allow disabling reports from SONATA config

#159 kbvw closed 4 months ago
2
Remove Report.hoc reference

#158 jorblancoa closed 4 months ago
1
Fix dead link from CONTRIBUTING.md to README.rst

#157 kbvw closed 4 months ago
3
[BBPBGLIB-1153] Allow disabling reports from SONATA config

#156 kbvw closed 4 months ago
4
Allow API configuration to preserve the axons during setup

#155 ferdonline closed 1 month ago
10
ChangeLog 3.2.0

#154 WeinaJi closed 4 months ago
1
Update docker file with the new data location

#153 WeinaJi closed 4 months ago
2
Update online-lfp.rst

#152 joseph-tharayil closed 4 months ago
2
[BBPGLIB-1148] Add support for gap junctions in dry run

#151 st4rl3ss closed 4 months ago
5
Replay with SONATA spikes files

#150 WeinaJi closed 5 months ago
5
[BBPGBLIB-1147] Fixes crashes with KeyError when running sonataconf-sscx-O1 circuit on dry run

#149 st4rl3ss closed 5 months ago
1
[BBPBGLIB-1145] Write gids without offset in WholeCell LB complexity file

#148 jorblancoa closed 4 months ago
17
[BBPBGLIB-739] Override UTF-8 for logging

#147 atemerev closed 3 months ago
8
[BBPBGLIB-1139] config / model error logging fix, stage 2

#146 atemerev closed 3 months ago
3