issues
search
CCB-SB
/
plsdb
PLSDB pipeline to collect bacterial plasmids from NCBI
https://ccb-microbe.cs.uni-saarland.de/plsdb/
34
stars
4
forks
source link
issues
Newest
Newest
Most commented
Recently updated
Oldest
Least commented
Least recently updated
I would like to know if the .fna files of plasmids downloaded from the PSDB website are all contigs?
#28
ZoeLct
closed
3 months ago
1
Error during sequence searching
#27
phamquynhhoa
closed
3 months ago
1
PLSDB webpage doesn't work
#26
marketanykrynova
closed
8 months ago
1
Adding NCBI assembly accession and 'Assembly Level' search results
#25
wtmatlock
closed
8 months ago
2
problem to use website
#24
Fla1487
closed
1 year ago
2
Resistance genes information
#23
mdiricks
closed
1 year ago
2
Next Update
#22
EduRoth
closed
8 months ago
8
Plasmid detected, but which contig?
#21
Kata-Pa
closed
1 year ago
2
Web search tool not working
#20
jgoff91
closed
2 years ago
1
API/website not working
#19
gbouras13
closed
1 year ago
1
updating the plsdb for 2022?
#18
intikhab
closed
1 year ago
1
Shared hashes
#17
elianapc
closed
1 year ago
3
Is this resource still getting updated?
#16
erinyoung
closed
2 years ago
1
README.md for PLSDB v. 2021_06_23
#15
haruosuz
closed
1 year ago
4
Include archaeal plasmids
#14
apcamargo
opened
2 years ago
2
Meta archive download error
#13
gavinmdouglas
closed
2 years ago
4
Missing Plasmid
#12
mweberr
closed
2 years ago
4
Small false positive plasmids
#11
Mishmash-su
closed
2 years ago
2
PLSDB (v. 2020_11_19) BioSample Attributes
#10
haruosuz
closed
2 years ago
3
Provide plasmid sequences for download
#9
oschwengers
closed
3 years ago
3
PLSDB need to have a min size threshold to include new plasmids.
#8
jnesme
closed
2 years ago
3
Download Fasta sequences
#7
ayabrown
closed
3 years ago
2
Species-specific plasmids?
#6
chahatupreti
closed
3 years ago
4
duplicate records
#5
haruosuz
closed
3 years ago
3
E coli plasmid sequences
#4
LeonardosMageiros
closed
3 years ago
1
Where to download the Plasmid fasta file？
#3
Winjor
closed
5 years ago
1
Reasonable parameters of Mash screen in containment analysis
#2
liangjinsong
closed
5 years ago
2
Missing description
#1
tseemann
closed
5 years ago
0