COMBINE-lab minnow issues

COMBINE-lab / minnow

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installation:minnow requires g++ 5.2 or greater

#29 mechealeth opened 7 months ago
0
compiling problem

#28 imerelli opened 1 year ago
1
What is the `true_cell_names.txt` file for?

#27 ColeWunderlich opened 1 year ago
0
Simulated 3'tagged single cell dataset

#26 Franzx7 opened 2 years ago
0
Can't seem to install minnow

#25 joelmeili opened 2 years ago
3
Less number of reads are produced that the truth matrix error

#24 baraaorabi closed 2 years ago
2
Decoys in README instructions

#23 baraaorabi closed 2 years ago
1
Simulated reads seem to not be compatible with Cell Ranger 6

#22 hoyu310 opened 3 years ago
3
Controlling whether there's multi-mapping in the simulated reads

#21 hoyu310 opened 3 years ago
0
adding custom read length

#20 hiraksarkar opened 3 years ago
0
--ReadLength in minnow simulate

#19 hoyu310 closed 3 years ago
6
No information on true UMI sequences?

#18 ColeWunderlich closed 2 years ago
6
Which fasta should be provided to minnow estimate?

#17 ColeWunderlich opened 3 years ago
0
Is Alevin mode still supported? -- Simulating from Alevin or CellRanger run

#16 ColeWunderlich opened 3 years ago
0
can not run minnow simulate

#15 yhg926 closed 4 years ago
0
what is -m option ?

#14 yhg926 closed 4 years ago
30
Applicability to 10X 5' Data?

#13 cohenp05 opened 4 years ago
1
compilation error on minnow-velocity branch

#12 daskelly closed 4 years ago
4
details of sequence uniqueness file?

#11 daskelly closed 4 years ago
5
std::invalid_argument: stoi: no conversion

#10 Acribbs closed 4 years ago
13
fixfasta executable does not respond appropriately to `--help` or `-h`

#9 ghferrari closed 1 year ago
11
NameError:

#8 yueli8 closed 4 years ago
2
quants_mat.gz is not a directory

#7 yueli8 closed 4 years ago
13
demo data of minnow

#6 yueli8 closed 4 years ago
9
New conda version

#5 hiraksarkar opened 5 years ago
5
Setting the number of reads and changing the length of transcript read

#4 NemanjaVucic90 closed 5 years ago
7
Changing the length of transcript read

#3 NemanjaVucic90 closed 5 years ago
2
Changing the length of the CB and UMI

#2 annajbott closed 5 years ago
26
Add a Gitter chat badge to README.md

#1 gitter-badger closed 5 years ago
0