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Clinical-Genomics
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hermes
Communication layer between CG and the pipelines.
https://clinical-genomics.github.io/hermes/
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feat(update): Python
#124
henrikstranneheim
closed
1 hour ago
4
eKLIpse files removed from clinical-delivery but added to long-term-storage for observation
#123
rannick
closed
5 days ago
1
add manifest
#122
rannick
closed
2 weeks ago
2
feat(update): Linters
#121
henrikstranneheim
closed
1 month ago
1
Update jinja2
#120
henrikstranneheim
closed
3 weeks ago
2
feat(update): setuptools
#119
henrikstranneheim
closed
1 month ago
3
add d4 files
#118
rannick
closed
1 month ago
2
Update files and tags for balsamic release 16.0.0
#117
mathiasbio
opened
1 month ago
1
Updating files and tags for release 16.0.0 of balsamic
#116
mathiasbio
opened
1 month ago
0
Add clinical-delivery and long-term-storage tags to Rnafusion
#115
ivadym
closed
1 month ago
1
add deliverable tag to qc-metrics deliver to mimic Balsamic and MIP
#114
rannick
closed
3 months ago
1
Force storage of incomplete analyses
#113
ivadym
closed
3 months ago
2
Store params file for tomte
#112
fevac
closed
4 months ago
2
Update software versions file
#111
sofstam
opened
4 months ago
0
Update tomte deliverables
#110
fevac
closed
5 months ago
2
Add raredisease HK tags
#109
rannick
closed
3 months ago
3
Homogenise tags and better define tag usage
#108
ChrOertlin
opened
5 months ago
4
(feat taxprofiler): Store multiqc intermediate json files
#107
sofstam
closed
5 months ago
5
Centralise Hermes documentation
#106
ivadym
opened
5 months ago
0
Add tomte HK tags
#105
fevac
closed
5 months ago
3
Update rnafusion deliverable files to use sample ID instead of case ID
#104
fevac
closed
1 month ago
2
Make tags as usable constants
#103
ivadym
closed
5 months ago
2
Use clinical-delivery and long-term-storage tags
#102
ivadym
opened
6 months ago
0
Store multiqc intermediate files for rnafusion
#101
fevac
closed
6 months ago
2
Add CONTRIBUTING and define tags for long-term storage and clinical delivery
#100
ivadym
closed
6 months ago
3
Add taxprofiler
#99
sofstam
closed
6 months ago
4
Add constants to hermes
#98
ChrOertlin
closed
5 months ago
1
add(codeowners for autoamtic pr tracking)
#97
ChrOertlin
closed
7 months ago
1
Remove Vogue, add Janus
#96
ivadym
closed
7 months ago
0
Store intermediate MultiQC files for Balsamic
#95
ivadym
closed
7 months ago
2
Refactor pipeline to workflow
#94
henrikstranneheim
closed
7 months ago
3
feat(pipeline): Refactor to workflow
#93
henrikstranneheim
closed
7 months ago
3
feat(sars-cov-2): Rename
#92
henrikstranneheim
closed
8 months ago
1
feat(cgmodels): Remove
#91
henrikstranneheim
closed
8 months ago
3
Refactor to pep 0663
#90
henrikstranneheim
closed
8 months ago
2
feat(refactor): Optional
#89
henrikstranneheim
closed
8 months ago
2
Refactor to pep 0585
#88
henrikstranneheim
closed
9 months ago
2
Add pre commit and black action
#87
henrikstranneheim
closed
9 months ago
2
Add Gens files for Balsamic WGS analysis
#86
ivadym
closed
8 months ago
3
Prepare deliverable files for rnafusion 3.0.1
#85
fevac
closed
9 months ago
2
add nextclade ks-delivery tag
#84
talnor
closed
1 year ago
2
fix: PyYAML compatibility breakage after Cython v3.0 update
#83
ivadym
closed
1 year ago
0
Add nextclade mutant
#82
talnor
closed
1 year ago
2
making fusion files optional for mip-rna
#81
jemten
closed
1 year ago
2
Add deepvariant report into housekeeper
#80
karlnyr
opened
1 year ago
0
Python update
#79
raysloks
closed
1 year ago
6
Update python
#78
henrikstranneheim
closed
1 year ago
0
add metrics files for rnafusion
#77
fevac
closed
1 year ago
2
Update rnafusion tags
#76
fevac
closed
1 year ago
2
adds tags for mobile elements
#75
jemten
closed
1 year ago
3
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