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GSTT-CSC
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TotalSegmentator-AIDE
TotalSegmentator packaged as an AIDE Application, based on the MONAI Application Package (MAP) standard.
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Problem when installing pycairo from requirements.txt
#40
MLK97
closed
9 months ago
1
24 publish map add container secure supply chain
#39
jordimassaguerpla
opened
1 year ago
0
Create GHA to test app end-to-end using monai-deploy exec
#38
tomaroberts
opened
1 year ago
1
Adds dcm2niix build instructions to README
#37
tomaroberts
opened
1 year ago
0
Adds GitHub Action to run unit tests
#36
tomaroberts
closed
1 year ago
0
Unit tests for dcm2niix_operator
#35
tomaroberts
closed
1 year ago
1
Add legend for colours on report
#34
hshuaib90
closed
1 year ago
2
Raise Exceptions to AIDE UI via metadata.json
#33
tomaroberts
opened
1 year ago
0
Copy edited ds_helper.py into MAP for fast ContourData rounding
#32
tomaroberts
closed
1 year ago
1
ContourData 10 d.p. workaround until rt-utils updated
#31
tomaroberts
closed
1 year ago
1
Create __version__.py
#30
tomaroberts
opened
1 year ago
0
Add checks/Exceptions to MAP if TotalSegmentator contours are empty
#29
tomaroberts
opened
1 year ago
0
Testing GHA with minimal MAP
#28
tomaroberts
closed
1 year ago
1
Encapsulated DICOM doesnt have DOC modality
#27
JoeBatt1989
closed
1 year ago
4
WIP: automated package and publish of MAP
#26
tomaroberts
opened
1 year ago
4
Add MAP end-to-end testing GitHub Action
#25
tomaroberts
opened
1 year ago
1
Add GitHub Action to publish MAP(s) on GHCR
#24
tomaroberts
opened
1 year ago
1
Remove podSpecPatch line from Argo Workflow files
#23
tomaroberts
closed
1 year ago
0
Remove podSpecPatch from Argo Workflow
#22
tomaroberts
closed
1 year ago
0
#4 add basic clinical rev output
#21
AnilMistry
closed
1 year ago
9
Add installation of dcm2niix in README setup instructions
#20
AnilMistry
opened
1 year ago
0
Update MAP with DICOM standard-compliant ContourData element (decimal places)
#19
tomaroberts
closed
1 year ago
0
Adds Clinical Workflow and Argo Workflow files for running on AIDE
#18
tomaroberts
closed
1 year ago
0
Adds initial unit tests and refactors some MAP operators code
#17
tomaroberts
closed
1 year ago
0
Adds TotalSegmentator weights to MAP
#16
tomaroberts
closed
1 year ago
1
comparing RT Utils with PyRadIse
#15
hshuaib90
closed
1 year ago
1
Change READMEs for MAP and MAP-init
#14
dbericat
opened
1 year ago
1
Add TotalSegmentator training weights to container
#13
tomaroberts
closed
1 year ago
1
Create build.yml
#12
tomaroberts
closed
1 year ago
1
Ensure output RT Struct DICOMs compatible with Eclipse
#11
tomaroberts
closed
1 year ago
7
Add build instructions to README
#10
tomaroberts
closed
1 year ago
1
Bump future from 0.18.2 to 0.18.3
#9
dependabot[bot]
closed
1 year ago
0
Adds RT Struct creation to last operator in MAP
#8
tomaroberts
closed
1 year ago
1
Improve integration of TotalSegmentator with MONAI Deploy
#7
tomaroberts
opened
1 year ago
1
Create Argo Workflow for AIDE
#6
tomaroberts
closed
1 year ago
1
Create Clinical Workflow for AIDE
#5
tomaroberts
closed
1 year ago
0
Create output for AIDE Clinical Review
#4
tomaroberts
closed
1 year ago
1
Convert segmentations from nii.gz to RT Struct
#3
tomaroberts
closed
1 year ago
1
Enable GPU when running TotalSegmentator MAP
#2
tomaroberts
closed
1 year ago
1
Updates with partially working MAP, tested on DGX
#1
tomaroberts
closed
1 year ago
0