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HelmchenLabSoftware
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Cascade
Calibrated inference of spiking from calcium ΔF/F data using deep networks
GNU General Public License v3.0
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Bug in utils.calibrated_ground_truth_artificial_noise()
#64
PTRRupprecht
closed
1 week ago
1
Wrong parameters of the Global_EXC_7.5Hz_smoothing200ms_high_noise model
#63
PTRRupprecht
closed
2 months ago
1
Add new high-noise models for 15 Hz and 40 Hz
#62
PTRRupprecht
closed
2 months ago
2
Problem with very noisy data
#61
PTRRupprecht
closed
3 months ago
2
Going through traces 1 by 1
#60
m-artin-p
closed
3 months ago
6
Noise Level
#59
Marx666
closed
3 months ago
6
Problem with ruamel.yaml
#58
PTRRupprecht
closed
10 months ago
1
Training models with high noise levels does not work properly
#57
PTRRupprecht
closed
10 months ago
1
Model request
#56
PTRRupprecht
closed
10 months ago
1
Problem when generating ground truth for low sampling rate and low noise models
#55
PTRRupprecht
closed
1 year ago
1
Same neuron having different noise levels in two trials
#54
aloejhb
closed
1 year ago
3
Smoothing of dF/F traces for prediction
#53
aloejhb
closed
1 year ago
2
Latest installation instructions (e.g. TensorFlow, CUDA versions)
#52
generalciao
closed
3 months ago
5
Train models at a framerate of 40 Hz
#51
PTRRupprecht
closed
1 year ago
1
Pretrained model download fails
#50
PTRRupprecht
closed
1 year ago
2
Any benchmarking with nonnegative least squares?
#49
fatihdinc
closed
1 year ago
2
New model trained at 7 Hz
#48
PTRRupprecht
closed
1 year ago
1
Inconsistent verbose
#47
fatihdinc
closed
1 year ago
2
Apple M1 Chip problem
#46
fatihdinc
opened
1 year ago
6
"Global_EXC_15Hz_smoothing50ms" model mislabeled?
#45
kimtonyhyun
closed
1 year ago
3
info_file_link URL broken
#44
generalciao
closed
1 year ago
3
Request for model training
#43
laura300
closed
7 months ago
6
Problem running Demo_benchmark_model.py
#42
Mariofe25
closed
3 months ago
14
Train models with less temporal smoothing
#41
PTRRupprecht
closed
2 years ago
1
df/f scaling variation with laserpower
#40
yannicko-neuro
opened
2 years ago
1
Train additional 4.25 Hz model
#39
PTRRupprecht
closed
2 years ago
3
1Hz Inference in Teleost (Danionella cerebrum)
#38
MaximilianHoffmann
closed
3 months ago
6
Bump tensorflow from 2.2.1 to 2.7.2
#37
dependabot[bot]
closed
2 years ago
1
Bump tensorflow from 2.2.1 to 2.7.2 in /etc
#36
dependabot[bot]
closed
2 years ago
1
Bump tensorflow from 2.2.1 to 2.6.4
#35
dependabot[bot]
closed
2 years ago
1
Bump tensorflow from 2.2.1 to 2.6.4 in /etc
#34
dependabot[bot]
closed
2 years ago
1
Non-verbose output during inference
#33
PTRRupprecht
closed
2 years ago
1
Experimental settings of "Comparison with existing methods"?
#32
tpzou
closed
2 years ago
14
Bump tensorflow from 2.2.1 to 2.5.3
#31
dependabot[bot]
closed
2 years ago
1
Bump tensorflow from 2.2.1 to 2.5.3 in /etc
#30
dependabot[bot]
closed
2 years ago
1
Conflicts in version of packages for local installation (for CPU)
#29
SimonZamora
closed
2 years ago
3
Discrepancy between DS01-OGB1-m-V1 and SpikeFinder dataset #2
#28
giovannidiana
closed
2 years ago
1
Train new models
#27
PTRRupprecht
closed
2 years ago
1
Bump tensorflow from 2.2.1 to 2.5.2
#26
dependabot[bot]
closed
2 years ago
1
Bump tensorflow from 2.2.1 to 2.5.2 in /etc
#25
dependabot[bot]
closed
2 years ago
1
Bump tensorflow from 2.2.1 to 2.5.1
#24
dependabot[bot]
closed
2 years ago
1
Fixfreq
#23
bouromain
closed
2 years ago
1
Interpretation of spike "prob"
#22
kimtonyhyun
opened
2 years ago
3
Bump tensorflow from 2.2.1 to 2.5.1 in /etc
#21
dependabot[bot]
closed
2 years ago
1
Prediction variable name in `Calibrated_spike_inference_with_Cascade.ipynb`
#20
kimtonyhyun
closed
3 years ago
2
Bump tensorflow from 2.2.1 to 2.5.1 in /etc
#19
dependabot[bot]
closed
3 years ago
0
Bump tensorflow from 2.2.1 to 2.5.0 in /etc
#18
dependabot[bot]
closed
3 years ago
1
Problem using h5py (load models)
#17
PTRRupprecht
closed
3 years ago
1
Update to newest version
#16
PTRRupprecht
closed
3 years ago
0
broken link for 'Global_EXC_15Hz_smoothing100ms'
#15
vdtang3
closed
3 years ago
2
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