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Illumina
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BeadArrayFiles
Python library to parse file formats related to Illumina bead arrays
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python3 support
#40
cmccabe0728
opened
2 months ago
2
Removes references to autoconvert/call, beeline, iaap-cli and points …
#39
jzieve
closed
3 months ago
0
Release 1.3.4
#38
mialam24
closed
6 months ago
0
Version updated to 1.3.4
#37
mialam24
closed
6 months ago
0
support more clusterfile versions
#36
mialam24
closed
6 months ago
0
Added Dockerfile to be used with ICA Nextflow pipeline
#35
mialam24
closed
11 months ago
1
Exception: Data block version in cluster file 7 not supported
#34
brettva
closed
1 year ago
3
docs: better format markdown with example usage
#33
lmtani
closed
1 year ago
2
Fix for LocusAggregate.aggregate_samples
#32
daveware-nv
closed
1 year ago
0
LocusAggregate.aggregate_samples only populates first LocusAggregate
#31
daveware-nv
closed
1 year ago
2
gtc to plink ped format - 0|G instead of A|G
#30
1teaspoon
opened
2 years ago
1
Obtaining GC and GT scores as columns in gtc_final_report.py
#29
evilvenom
opened
2 years ago
1
Error on calling TOP_strand genotypes
#28
zihhuafang
closed
3 years ago
2
Error: Exception: GTC file is incomplete
#27
tengfeixiaozhu
opened
3 years ago
8
Gentrain score in ClusterFile.py
#26
Derrup
opened
3 years ago
1
Release 1.3.3
#25
jjzieve
closed
3 years ago
0
Feature/python3 dna report
#24
jjzieve
closed
3 years ago
0
Add unit tests
#23
jjzieve
opened
3 years ago
0
Toggle to remove loci that have been zeroed out in cluster file from DNA summary report
#22
jjzieve
opened
3 years ago
0
Need further clarifications on the return values of GenotypeCalls.py module
#21
plusmid
opened
4 years ago
3
GTC file version 3 can't output B allele frequencies and logr
#20
Liiiii2101
opened
4 years ago
8
File specification for cluster files
#19
brettvanderwerff
opened
4 years ago
0
Added support for Top Alleles, added more report options
#18
mjung2019
opened
5 years ago
0
Omni5 issue
#17
jjzieve
closed
4 years ago
4
Error from a call to a function from IlluminaBeadArrayFiles
#16
mirrorlake999
opened
5 years ago
7
Illumina strand from manifest
#15
kaylahardwick
opened
5 years ago
2
Small difference observed in the normalized X and Y signals between GenomeStudio vs Illumina:BeadArrayFiles
#14
Gerbenvandervries
closed
5 years ago
5
Upped to version 1.3.3.
#13
basickler
closed
3 years ago
1
Merge development into Master
#12
basickler
closed
3 years ago
2
gtc_final_report.py
#11
smuchakiel
closed
6 years ago
7
Change the order of checking the arguments in the example code. (develop)
#10
MinSungKing
closed
6 years ago
1
Change the order of checking the arguments in the example code.
#9
MinSungKing
closed
6 years ago
2
Merge release back to develop
#8
KelleyRyanM
closed
7 years ago
0
Check write completion
#7
KelleyRyanM
closed
7 years ago
0
Incorporate fix from ekarlins
#6
KelleyRyanM
closed
7 years ago
9
Sync develop with latest master
#5
KelleyRyanM
closed
7 years ago
0
Incorporating fix from ekarlins
#4
KelleyRyanM
closed
7 years ago
0
fixed zero division error in normalize_intensities
#3
ekarlins
closed
7 years ago
3
Determining log r ratio and b allele frequency
#2
palijmath
closed
7 years ago
1
Weird Basecall result
#1
yyna
closed
7 years ago
1