issues
search
MannLabs
/
SPARCSpy
9
stars
6
forks
source link
issues
Newest
Newest
Most commented
Recently updated
Oldest
Least commented
Least recently updated
Cellpose Segmentation generates incomplete masks
#35
sophiamaedler
opened
2 months ago
0
Cellpose Filtering Workflow Bug
#34
sophiamaedler
opened
2 months ago
0
Timecourse regression model
#33
namsaraeva
closed
2 months ago
7
Segmentation not possible in TimecourseProject if `overwrite=True`
#32
namsaraeva
opened
3 months ago
0
Accelerate segmentation postprocessing with sparse matrices
#31
tatyana-perlova
opened
4 months ago
1
Fix model type in acc and auroc
#30
sophiamaedler
closed
6 months ago
0
Update README.md
#29
nik-as
closed
6 months ago
0
Check folder structure when loading input images
#28
namsaraeva
opened
7 months ago
0
Improvements of the filtering method
#27
namsaraeva
closed
6 months ago
1
Dev multi gpu
#26
sophiamaedler
closed
9 months ago
0
Update README.md
#25
nik-as
closed
9 months ago
0
Added documentation
#24
namsaraeva
closed
9 months ago
0
Update workflows.py
#23
lucasmiranda42
closed
1 year ago
0
Improvements Example Workflow Documentation
#22
sophiamaedler
opened
1 year ago
0
update documentation
#21
sophiamaedler
closed
1 year ago
0
Code Updates
#20
sophiamaedler
closed
1 year ago
0
Downsampling images
#19
namsaraeva
closed
1 year ago
0
Padding bug fix
#18
namsaraeva
closed
1 year ago
0
Issue with the images being too small
#17
namsaraeva
closed
1 year ago
0
Updated segmentation
#16
namsaraeva
closed
1 year ago
4
GPU usage and numba int64 fix
#15
namsaraeva
closed
1 year ago
2
Code cleanup pre pub
#14
sophiamaedler
closed
1 year ago
0
merge new repository version into main to work on documentation
#13
sophiamaedler
closed
1 year ago
0
merge updated code into main branch to work on documentation
#12
sophiamaedler
closed
1 year ago
0
write function to cleanup "excess" data
#11
sophiamaedler
closed
2 years ago
2
replace WGA with cytosol to make code more standardised
#10
sophiamaedler
closed
12 months ago
1
Error Message segmentation + extraction + classification pipeline
#9
sophiamaedler
closed
1 month ago
0
recalculates segmentation even though segmentation has completed if parameters change to intermediate = True
#8
sophiamaedler
opened
2 years ago
1
Save filtered cell plots when debug = True in Segmentation Pipeline
#7
sophiamaedler
closed
1 month ago
0
Context Class for Logable which allows redirecting stdout to log
#6
GeorgWa
opened
2 years ago
0
Documentation Improvements
#5
sophiamaedler
closed
12 months ago
1
Improve Log Output when Segmenting Images
#4
sophiamaedler
closed
1 month ago
2
Check types in Dataset and for accessory datasets
#3
GeorgWa
opened
2 years ago
0
Code Redundancy in WGASegmentation
#2
sophiamaedler
closed
2 years ago
0
Pip install fails on linux
#1
sophiamaedler
closed
2 years ago
1