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PacificBiosciences
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pbbioconda
PacBio Secondary Analysis Tools on Bioconda. Contains list of PacBio packages available via conda.
BSD 3-Clause Clear License
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isoseq3 refine filters many reads
#711
Mikai10043
opened
5 days ago
1
pbfusion panicked at CIGAR
#710
biyang-bioinfo
closed
1 week ago
2
Request for improved pbmm2 error message around zipped references
#709
mrvollger
opened
2 weeks ago
0
the number of reads pre and post running "isoseq refine"
#708
WQQIGDB
opened
2 weeks ago
3
Auto thread detection in pbmm2 too high on slurm HPC
#707
mrvollger
opened
3 weeks ago
2
Compatability with VACmap
#706
jamesc99
opened
3 weeks ago
0
[pbfusion] Error from visualize_fusion.py
#705
dbswls0322
opened
1 month ago
1
Certain reads with missing methylation modification tags
#704
tobybaker
opened
1 month ago
2
How do I control
#703
SethMagnusJarvis
closed
1 month ago
4
TRGT v1.0.0
#702
fo40225
opened
1 month ago
0
Example Kinnex data set error 404
#701
FabianJetzinger
opened
2 months ago
1
pbmerge - overlapping movie/zmw combination
#700
gevro
opened
2 months ago
2
CRAM support for more tools
#699
mrvollger
closed
1 month ago
1
Iso-Seq Pigeon classify GTF error
#698
akulan1
closed
2 months ago
1
PBSV system requirements
#697
MKaandemir
closed
2 months ago
3
What's the difference of = and X cigar of pbmm2?
#696
leon945945
closed
3 months ago
3
lima not outputting enough ZMWs - issue with primers or primer choice?
#695
carla-hazelf
closed
2 months ago
1
isoseq groupdedup for variant analysis
#694
gneedle1
closed
2 months ago
1
What can I do only with .fastq reads?
#693
dudududu12138
closed
2 months ago
1
isoseq for scRNA: UMI with homopolymers are not removed
#692
JiangyanYu
closed
2 months ago
1
isoseq for scRNA: duplicate molecules are kept
#691
JiangyanYu
closed
2 months ago
1
IsoPhase on MAS-Iso-seq data for haplotyping
#690
camelest
closed
2 months ago
2
identify transcripts with polyA tails
#689
ZachLW
closed
2 months ago
1
iso-seq reads and pbfusion
#688
mariachiara-github
closed
3 months ago
2
Generate HiFi reads
#687
mariachiara-github
closed
2 months ago
1
isoseq3 collapse stops with fatal error map::at
#686
jchariker
closed
2 months ago
3
Isoseq3 cluster2 exits without error message
#685
sagnikbanerjee15
closed
2 months ago
2
isoseq correct is very sensitive for style of input
#684
chvandijk
closed
2 months ago
1
Segmentation fault (core dumped) when installing ilma.
#683
JiaLonghao1997
closed
2 months ago
1
pigeon classification doesn't work (Chinese Hamster)
#682
yesh1m
closed
2 months ago
5
Lima failing to detect CCS data after Skera de-concatination & Bam2Fastq conversion
#681
roylejw
closed
2 months ago
1
filter
#680
lva85
closed
2 months ago
1
Cannot download Iso-Seq example data
#679
ianyfchang
closed
2 months ago
2
Error while running Falcon
#678
ptamamang24
closed
4 months ago
1
lima ERROR: [pbcopper] alarm ERROR: cannot write to empty alarm filename
#677
kenneditodd
closed
2 months ago
13
The *.flnc_count.txt output from isoseq collapse does not generate columns for multiple samples
#676
YanqingHuang01
closed
2 months ago
2
CL: Annotation of alignment classes
#675
mariachiara-github
closed
4 months ago
7
Demultiplexing using lima
#674
Nitin123-4
closed
5 months ago
2
Mapping MT and RP genes from 10x single cell kinnex
#673
ollieeknight
closed
2 months ago
2
Isoseq3 cluster fatal run
#672
EglantineMB
closed
2 months ago
2
questions about pbsv
#671
rabbitdsy
closed
2 months ago
1
dedup
#670
marcus-tutert
closed
2 months ago
1
hifihla call-reads: thread 'main' panicked at src/cli/callreads_cli.rs:320:14:
#669
hhuili
closed
5 months ago
3
Convert FASTQ in unaligned BAM
#668
mariachiara-github
closed
5 months ago
1
isoseq refine
#667
marcus-tutert
closed
2 months ago
10
ipa fails at 18-purge_dups
#666
tpshea2
closed
2 months ago
1
pbfusion
#665
tky199996
closed
5 months ago
11
Isoseq collapse filtering out criteria
#664
MengjunWu
closed
2 months ago
2
Help for " FATAL | ccs ERROR: map::at" using ccs
#663
yuan102379
closed
5 months ago
5
pbmm2 issue (1.7.0)
#662
tanyasarkjain
closed
5 months ago
2
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