RGLab QUALIFIER issues - Githubissues

RGLab / QUALIFIER

Qualitiy control for gated flow cytometry data

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issues

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FCS_File_mapping.csv

#51 baj12 opened 4 years ago
3
Problem taking in metadata file whose column "name" contains fcs file with spaces

#50 JauntyJJS opened 8 years ago
0
Error occur when running example dataset (Error in outlierfunc$args)

#49 JauntyJJS opened 8 years ago
1
Not all ID found in meta data of this GatingSet

#48 JauntyJJS closed 8 years ago
10
put svg output as enhanced feature so that it can be built on windows

#47 mikejiang closed 10 years ago
0
popup onclick in svg output

#46 mikejiang opened 10 years ago
9
show strips on both top and side

#45 mikejiang opened 10 years ago
5
customize date format when parsing date columns

#44 mikejiang closed 10 years ago
0
XML::replaceNodes crashes R

#43 mikejiang closed 10 years ago
2
save_db/load_db

#42 mikejiang closed 10 years ago
0
replace read.csv with fread

#41 mikejiang closed 10 years ago
2
A check is in order in the .getQAStats.gh method, when 'pops' filtering results in an empty set of population nodes to process

#40 ldash closed 10 years ago
2
Modify the format of the 'csv' input file with the QA tasks

#39 ldash closed 10 years ago
1
convert current Rd doc to roxygen using Rd2roxygen

#38 mikejiang closed 11 years ago
1
apply ggplot2like theme to QA plots

#37 mikejiang closed 11 years ago
0
redefine the nodeType for qa definition

#36 mikejiang closed 11 years ago
2
add pop indices to getQAStats to specify population of interests

#35 mikejiang closed 11 years ago
0
latest R revision breaks qaCheck

#34 mikejiang closed 11 years ago
1
The vignette doesn't build. Gives an error on chunk 9

#33 gfinak closed 11 years ago
1
There is a bug in .queryStats when isTerminal=TRUE and fixed=TRUE

#32 gfinak closed 11 years ago
0
validity check for the study variable names in formula

#31 mikejiang opened 11 years ago
0
Issue with annotation data columns containing non-standard characters ...

#30 ldash closed 11 years ago
2
When qaPreprocess() call is made without the metaFile argument, then the existing annotation data in the gating set gets overwritten

#29 ldash closed 11 years ago
0
queryStats expects tube column

#28 mikejiang closed 11 years ago
2
boolean gate not supported by getQAStats

#27 mikejiang closed 11 years ago
0
integration with labkey

#26 mikejiang closed 11 years ago
3
the data format for the expected total number of events

#25 mikejiang closed 10 years ago
0
extend the current population stats extraction API:getQAStats

#24 mikejiang closed 10 years ago
1
Client side issue with displaying outliers in the pdf vignette file

#23 ldash opened 12 years ago
0
abstract DB-CRUD layer

#22 mikejiang opened 12 years ago
0
Error while creating a GatingSet: can it be reproduced by others?

#21 ldash closed 12 years ago
3
pass lattice graphic settings to qaPlot

#20 mikejiang closed 12 years ago
0
speed issue of getQAStats

#19 mikejiang closed 12 years ago
0
document the change for issue #11 and #12

#18 mikejiang closed 12 years ago
0
address the errors in new created html report

#17 mikejiang closed 12 years ago
0
merge qa.GroupPlot and qa.singlePlot

#16 mikejiang closed 12 years ago
0
ITN comments 5: add summary table of FCS that failed different QA checks

#15 mikejiang closed 12 years ago
0
ITN comments 4: Sufficient RBC lysis

#14 mikejiang closed 12 years ago
0
ITN comments 3: Off-scale Boundary Events

#13 mikejiang closed 12 years ago
6
ITN comments 2: add option to control the individual scatter plot

#12 mikejiang closed 12 years ago
1
ITN comments 1: Fluorescence stability over time

#11 mikejiang closed 12 years ago
0
add multiple Gating Sets and the actual database support

#10 mikejiang closed 12 years ago
0
add methods for non-QA type plot

#9 mikejiang opened 12 years ago
0
formula parsing issue

#8 mikejiang opened 12 years ago
0
add argument to control the display of gating path

#7 mikejiang opened 12 years ago
0
change the capital "S" in Subset argument

#6 mikejiang closed 12 years ago
0
test and check the package for submission

#5 mikejiang closed 12 years ago
0
speed issue of getQAStat

#4 mikejiang opened 12 years ago
3
empty panel in redundant staining plot

#3 mikejiang closed 12 years ago
0
a more generic way to specify population on which QA is to be done

#2 mikejiang closed 12 years ago
1