Authors: Brian Schilder, Jack Humphrey, Towfique Raj

README updated: Oct-20-2023

echodata: Examples of fine-mapped GWAS summary statistics, data formatting functions, and API access to the echolocatoR Fine-mapping Portal.

This R package is part of the echoverse suite that supports echolocatoR: an automated genomic fine-mapping pipeline.

If you use echodata, please cite:

Brian M Schilder, Jack Humphrey, Towfique Raj (2021) echolocatoR: an automated end-to-end statistical and functional genomic fine-mapping pipeline, Bioinformatics; btab658, https://doi.org/10.1093/bioinformatics/btab658

Installation

if(!require("remotes")) install.packages("remotes")

remotes::install_github("RajLabMSSM/echodata")
library(echodata)

Documentation

Website

Getting started

Contact

Brian M. Schilder, Bioinformatician II
Raj Lab
Department of Neuroscience, Icahn School of Medicine at Mount Sinai