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RegulatoryGenomicsGroup
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chicdiff
A differential caller for capture Hi-C data
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Plotting gene names along with bait IDs in plotDiffBaits
#22
RomeroMatt
opened
5 months ago
4
Order of test and control entry for fold change interpretation
#21
wilsoner2175
opened
7 months ago
0
Error in argument Type
#20
RomeroMatt
closed
7 months ago
12
Significant interaction
#19
FN2023
opened
1 year ago
0
ChicDiff differential loop calling
#18
FN2023
opened
1 year ago
1
How to use plotdiffBaits to show the results of 4 condition
#17
FN2023
opened
1 year ago
5
Can not dowload chicdiff
#16
FN2023
opened
1 year ago
6
Unable to download because of - Error in utils:
#15
vishimenon28
opened
1 year ago
3
multiple designDir for chicdiff?
#14
aturocks
opened
1 year ago
4
question about the resulting OE coordinate
#13
baishengjun
opened
2 years ago
1
getCandidateInteractions() output interpretation
#12
Mavti
opened
2 years ago
1
problem with test dataset
#11
Meowth-3Dchr
opened
4 years ago
0
Running IHWcorrection: error
#10
odovgusha
opened
4 years ago
2
Error in getFullRegionData
#9
gitgitmonkey
opened
4 years ago
2
Which sample is used as a 'treatment'/'control' in ChicDiff pipeline?
#8
AdrijaK
closed
4 years ago
2
Semantic problem: interaction-level normalization factor computation
#7
armenabnousi
opened
4 years ago
1
plotDiffBaits() error: Aesthetics must be either length 1 or the same as the data (1): colour, x, y
#6
AdrijaK
closed
4 years ago
2
Internal error: Failed to allocate counts or TMP when assigning g in gforce
#5
maharshi14
closed
4 years ago
9
ERROR during tutorial
#4
chesi
closed
4 years ago
16
Error in running getRegionUniverse
#3
MigleMi
opened
5 years ago
3
Installation instructions Query
#2
StevenWingett
closed
5 years ago
0
Make the designdir before running
#1
vmalysheva
closed
5 years ago
3