RuleWorld rulebender issues

RuleWorld / rulebender

Rule-Based Modeling and Simulation Gui

http://bionetgen.org

12 stars 7 forks source link

issues

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Unable to start RuleBender after installation

#221 TorkelE opened 2 years ago
0
Help: An error has occured. See the log file.

#220 Susana465 closed 3 years ago
4
Plotting of results freezes RuleBender

#219 OleksiiR opened 3 years ago
2
Problem in running RuleBender on HiDPI screens

#218 OleksiiR opened 4 years ago
6
Bug in Loading New Bionetgen project:

#217 steve37064 opened 4 years ago
0
Clicking on "Cancel operation" in Progress View leaves zombie run_network process on Mac

#216 jrfaeder opened 4 years ago
0
Force dev

#215 ASinanSaglam closed 5 years ago
0
Added bug fix to unreadable axis depending on range and improved rerun FDLM functionality

#214 PrateekAdurty closed 5 years ago
0
Added bug fix to unreadable axis depending on range and added rerun FDLM Button

#213 PrateekAdurty closed 5 years ago
1
Bug fixes, gif to png conversion and text to contact map highlighting

#212 ASinanSaglam closed 5 years ago
0
Several bug fixes and version uptick

#211 ASinanSaglam closed 5 years ago
0
Can not stop simulation from inside RuleBender

#210 iustin94 closed 6 years ago
2
Windows Version - doesn't start - incorrect JDK/JRE

#209 EricGT closed 6 years ago
2
Reminder to update all instances of version number for the next build (2.3.2)

#208 jrfaeder opened 6 years ago
1
No graph is displayed if no observables defined

#207 jrfaeder opened 6 years ago
0
RB doesn't allow comments at the end of continued lines

#206 jrfaeder opened 6 years ago
1
Numeric line labels cause RB console crash

#205 jrfaeder closed 5 years ago
0
Cannot get past pick workspace dialog, os x 10.11

#204 ghost closed 6 years ago
1
Functions on right hand side

#203 arazi2 opened 7 years ago
2
Contact map failure when rules contain multiple instances of molecules (see Issue 195)

#202 rhclark closed 6 years ago
3
Parameter expression bug

#201 jrfaeder closed 6 years ago
2
Continuation line in observables section causes simulation failure in RuleBender

#200 rhclark closed 4 years ago
0
An empty function definition creates problems

#199 rhclark closed 7 years ago
1
Plotting issue reported by Bill Hlavacek

#198 rhclark closed 4 years ago
5
Recommendations from John Sekar

#197 rhclark opened 8 years ago
1
Bill Hlavacek's Species Graph Bug

#196 rhclark closed 6 years ago
1
java.lang.NullPointerException on save

#195 jrfaeder closed 6 years ago
3
Initialize _KeyRememberWorkspace in the constructor for PickWorkspaceDialogue

#194 rhclark opened 8 years ago
0
BNG Root Path isn't remembered as default

#193 ryants closed 8 years ago
7
Some ideas for automation of installation testing on various platforms, including GUI testing.

#192 rhclark opened 8 years ago
0
Investigate RuleBender upgrade installation issue on Linux

#191 rhclark closed 6 years ago
0
Fix the Macintosh caveat about Java on the website.

#190 rhclark closed 6 years ago
0
Do some failure testing involving perl.

#189 rhclark closed 6 years ago
0
Fix bug in management of projects during workspace recovery.

#188 rhclark closed 6 years ago
0
Hilight errors in Red in the console.

#187 rhclark opened 8 years ago
0
Make the creation of a new project easier.

#186 rhclark closed 7 years ago
1
Move the "New BioNetGen Model"

#185 rhclark closed 7 years ago
1
2 fixes for the "block region comment command".

#184 rhclark opened 8 years ago
0
Increase time limit for Contact map generation.

#183 rhclark closed 7 years ago
1
Check java version internally and put up error message if necessary.

#182 rhclark closed 7 years ago
2
Add a formal check to see if the BioNetGen directory is where it's supposed to be.

#181 rhclark closed 7 years ago
1
Unusual scenario causes a failure in the "comment repeat" fuction.

#180 rhclark closed 8 years ago
1
Reading a .bngl file with errors in it, causes a traceback.

#179 rhclark closed 6 years ago
1
BNG Parser not running in 2.1.0 Mac version on some machines

#178 jrfaeder closed 8 years ago
3
Preserve settings for Contact Map

#177 rhclark closed 8 years ago
1
Check into "out of memory error" while calling Mosbie on the Mac.

#176 rhclark closed 6 years ago
0
Grid control on small multiples view

#175 jjtapia opened 8 years ago
1
Saving an image to file from the small multiples view

#174 jjtapia opened 8 years ago
1
Check this article, to see if the technique works for corrupted workspaces.

#173 rhclark closed 8 years ago
1
The Influence Graph is broken.

#172 rhclark closed 6 years ago
1