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SABS-R3-Epidemiology
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branchpro
Using branching processes to estimate the time-dependent reproduction number of a disease with imported cases
BSD 3-Clause "New" or "Revised" License
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teach users to run inference app locally
#236
rccreswell
closed
1 month ago
2
Negative binomial notebook
#235
rccreswell
closed
7 months ago
1
new mers figure
#234
rccreswell
closed
8 months ago
1
latest pandas
#233
rccreswell
closed
8 months ago
0
Issue 231 read te docs
#232
I-Bouros
closed
1 year ago
1
Fix broken doc
#231
rccreswell
closed
1 year ago
0
Support latest pandas version
#230
rccreswell
closed
8 months ago
0
fix pandas versions
#229
I-Bouros
closed
1 year ago
1
fix
#228
rccreswell
closed
1 year ago
1
write posterior calculations in C
#227
rccreswell
closed
1 year ago
1
identifiability of overdispersion parameter
#226
I-Bouros
opened
1 year ago
0
First instantiation of new posterior class for possbranchpro
#225
I-Bouros
closed
1 year ago
1
Compare negative binomial to poisson noise
#224
I-Bouros
closed
1 year ago
2
Log-likelihood computation for Branching Processes with negative binomial noise
#223
I-Bouros
closed
1 year ago
2
negative binomial forwards model
#222
rccreswell
closed
1 year ago
0
Heroku ending free hosting November 28
#221
rccreswell
closed
8 months ago
0
add published paper to web app
#220
rccreswell
closed
1 year ago
1
Issue 216 update heatmap
#219
I-Bouros
closed
2 years ago
1
allow different dates
#218
rccreswell
closed
2 years ago
1
Allow figures to have different start dates
#217
rccreswell
closed
2 years ago
0
Updates to heatmap
#216
I-Bouros
closed
2 years ago
1
changes to figures.py for revisions
#215
rccreswell
closed
2 years ago
1
Issue 210 new forward simulation
#214
I-Bouros
closed
2 years ago
2
make sure bounds are numeric in results dataframe
#213
rccreswell
closed
2 years ago
1
calculate epsilon for given countries
#212
rccreswell
closed
2 years ago
1
Estimate epsilon from demographic data
#211
rccreswell
closed
2 years ago
0
New forward simulation
#210
rccreswell
closed
2 years ago
1
Update license
#209
I-Bouros
closed
2 years ago
1
Update license
#208
I-Bouros
closed
2 years ago
0
Issue 206 progress bar
#207
rccreswell
closed
2 years ago
1
Add loading animation to posterior figure
#206
rccreswell
closed
2 years ago
0
Deal with slow callbacks on deployed inference app
#205
rccreswell
closed
2 years ago
0
Separate callbacks
#204
I-Bouros
closed
2 years ago
2
Improve deployment
#203
rccreswell
closed
2 years ago
3
Add mers plotting argument
#202
FarmHJ
closed
2 years ago
2
sentence about slider appearing
#201
rccreswell
closed
2 years ago
1
Set decimal places for heatmap axis labels
#200
FarmHJ
closed
2 years ago
0
Missing argument for branchpro.figures.plot_regions_inference
#199
FarmHJ
closed
2 years ago
0
write disclaimer
#198
rccreswell
closed
2 years ago
1
Finalize app text
#197
rccreswell
closed
2 years ago
2
Issue 195 code optimization
#196
rccreswell
closed
2 years ago
2
Speed up calculation of posterior
#195
rccreswell
closed
2 years ago
0
193 fix pandas warning
#194
rccreswell
closed
2 years ago
1
Bug in Ontario's parse_data.py
#193
FarmHJ
closed
2 years ago
1
changes to figures
#192
rccreswell
closed
2 years ago
1
Works for fig 3
#191
I-Bouros
closed
2 years ago
1
Figure 3 work
#190
rccreswell
closed
2 years ago
0
Issue 181 cleaning repo
#189
I-Bouros
closed
2 years ago
1
Issue 187 pages
#188
rccreswell
closed
2 years ago
3
Make a github page for the app link
#187
rccreswell
closed
2 years ago
0
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