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SWC-Advanced-Microscopy
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measurePSF
Measure PSF FWHM along different axes
GNU Lesser General Public License v3.0
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Disable bidi for PSFs?
#73
raacampbell
opened
1 month ago
0
Need to copy microscope settings files to data directories
#72
raacampbell
opened
1 month ago
1
Failing to find `snakeyaml` in this repo so can't load settings
#71
raacampbell
closed
1 month ago
1
Updates for issue #68- creating new function to make recording functions uniform in how they work
#70
iwhiteley
closed
1 month ago
3
minor change to readme
#69
iwhiteley
closed
1 month ago
1
Create variable input prompts in record.PSF
#68
iwhiteley
closed
1 month ago
2
Can standard light source data go into one file?
#67
raacampbell
closed
1 month ago
1
Output stats from plot/analysis functions
#66
raacampbell
opened
3 months ago
0
Make sure the report generation works as expected and update the readme to describe it
#65
raacampbell
closed
1 year ago
0
Are we plotting var or SD in gain plots?
#64
raacampbell
closed
1 year ago
1
Consider getting rid of the requirement for the image processing toolbox
#63
raacampbell
opened
1 year ago
0
get rid of parallel computing requirement in load 2D tiff
#62
raacampbell
closed
1 year ago
1
ScanImage state not returned to previous settings after running lens paper
#61
raacampbell
opened
2 years ago
1
electrical noise should only turn off existing PMTs
#60
raacampbell
closed
3 months ago
1
recordPSF fails to work with ScanImage Basic 2021
#59
raacampbell
opened
2 years ago
0
Grid measure tool does not pull in average image
#58
raacampbell
closed
3 years ago
1
recordPSF should only run with one channel enabled for saving
#57
raacampbell
closed
1 month ago
1
Polish labels in measurePSF
#56
raacampbell
opened
4 years ago
0
Add option to use slow-z device to recordPSF
#55
raacampbell
opened
4 years ago
0
Axis numbers along the ZY and ZX plots seem wrong
#54
raacampbell
opened
4 years ago
1
Add a 1 micron X/Y scale bar with a label
#53
raacampbell
opened
4 years ago
0
Labels missing or need modifying in measurePSF
#52
raacampbell
closed
4 years ago
6
Label axes in grid plot
#51
raacampbell
opened
4 years ago
0
Contour plot of fluorescent slide
#50
raacampbell
opened
4 years ago
0
recordPSF save date is not correct
#49
raacampbell
closed
4 years ago
1
fname not made correctly in measurePSF.m
#48
raacampbell
closed
4 years ago
3
recordPSF fails if PC username contains a hyphen
#47
raacampbell
opened
4 years ago
1
In R2019b the top right plot does not expand when the user zooms
#46
raacampbell
closed
4 years ago
1
Add a URL to the repo in each saved image
#45
raacampbell
opened
4 years ago
0
Ensure pixels in XY and YZ projections are square
#44
raacampbell
opened
4 years ago
1
Add legends to measurePSF
#43
raacampbell
closed
4 years ago
1
Label the plots more clearly in measurePSF
#42
raacampbell
closed
4 years ago
1
Axial PSF isn't calculated along the axis of the PSF
#41
raacampbell
opened
4 years ago
0
Confirm that grid measurement is only needed at one zoom value
#40
raacampbell
closed
4 years ago
1
Ensure recordPSF works with coarse Z
#39
raacampbell
closed
4 years ago
3
measurePSF lacks x/y FWHM in some circumstances
#38
raacampbell
closed
4 years ago
1
Option to set main SI window to have look-up table be jet(10)
#37
raacampbell
opened
4 years ago
1
measurePSF would be nice if it could also take stack into fluorcal slide
#36
raacampbell
opened
4 years ago
0
grid GUI image top right is not autoscaled nicely
#35
raacampbell
opened
4 years ago
0
apply FOV in grid GUI failed on Fred's reso rig
#34
raacampbell
closed
4 years ago
1
grid GUI should have a ‘save figure’ button to save pdf of output
#33
raacampbell
closed
4 years ago
1
recordPSF saved file name date and time are wrong
#32
raacampbell
closed
4 years ago
1
Graphically provide input options to Grid2MicsPerPixel
#31
raacampbell
closed
4 years ago
1
Should be able to run measurePSF without input args
#30
raacampbell
opened
4 years ago
1
Function to alter a scan axis to achieve a square grid
#29
raacampbell
opened
4 years ago
0
Add to Grid measurement window options pull new grid image and set FOV
#28
raacampbell
closed
4 years ago
2
Slider motion is quite laggy in measurePSF
#27
raacampbell
opened
4 years ago
1
measurePSF should take a file name as an input
#26
raacampbell
closed
4 years ago
1
Why do NeuroVision--imaged beads not measure with the tool?
#25
raacampbell
closed
4 years ago
1
Add scrolling plot of mean intensity
#24
raacampbell
closed
4 years ago
2
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