TIBHannover BacDiveR issues

TIBHannover / BacDiveR

Inofficial R client for the DSMZ's Bacterial Diversity Metadatabase (former contact: @katrinleinweber). https://api.bacdive.dsmz.de/client_examples seems to be the official alternatives.

https://TIBHannover.GitHub.io/BacDiveR/

MIT License

11 stars 12 forks source link

issues

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Newest Most commented Recently updated Oldest Least commented Least recently updated

installation

#121 ariasamin opened 1 year ago
1
get a null result

#120 Erique29 opened 2 years ago
1
Failed to install the package

#119 CipherTwo closed 2 years ago
2
Add deprecation note & link to alternatives

#118 katrinleinweber closed 2 years ago
1
Sanitise species names with partial matches of invalid terms correctly

#117 katrinleinweber opened 3 years ago
0
Illegal character error for valid taxa

#116 gregpoore opened 3 years ago
1
R devtools installation hangs on testing for >1 hour

#115 gregpoore closed 3 years ago
4
How to download the full database

#114 zji90 closed 2 years ago
3
Fix typo

#113 katrinleinweber opened 4 years ago
0
bd_retrieve_by_search output

#112 leandronascimentolemos opened 4 years ago
2
Release v0.9.1

#111 katrinleinweber closed 4 years ago
0
Blank search results and not error when password changed but not in Renviron file

#110 jfy133 opened 4 years ago
3
PR DEMO

#109 katrinleinweber closed 5 years ago
0
Complete API transition before v0.9.0

#108 katrinleinweber closed 5 years ago
0
clarify development model: GitHub Flow

#107 katrinleinweber opened 5 years ago
0
Update issue templates

#106 katrinleinweber closed 5 years ago
1
Find smaller examples for docu & test them

#105 katrinleinweber closed 5 years ago
0
New bd_retrieve...() API to deprecate retrieve_data() & retrieve_adv_search()

#104 katrinleinweber closed 5 years ago
1
Deploy docu with Travis

#103 katrinleinweber closed 5 years ago
0
Update docu to smaller example & clearer dev workflow

#102 katrinleinweber closed 5 years ago
0
Add Travis-CI (fix #15)

#101 katrinleinweber closed 5 years ago
2
Converting retrieve_data() results to a data frame (tibble)

#100 jfy133 opened 5 years ago
7
Simplify prepare_Renviron() with usethis::edit_r_environ()

#99 katrinleinweber opened 5 years ago
0
Reduce dependencies

#98 katrinleinweber closed 5 years ago
0
Replace httr with crul?

#97 katrinleinweber opened 5 years ago
0
new API for BacDiveR

#96 katrinleinweber closed 5 years ago
3
Convenience functions for downloading entire domain, phylum, class, order & family

#95 katrinleinweber opened 5 years ago
0
Update docu

#94 katrinleinweber closed 5 years ago
0
Stop or warn if a dataset doesn't exist?

#93 katrinleinweber closed 5 years ago
0
retrieve_data: argument is of length zero

#92 jotech closed 5 years ago
1
Error: lexical error: invalid character inside string

#91 jotech closed 5 years ago
7
Could not find function "%>%" error in retrieve_search_results() example

#90 katrinleinweber closed 5 years ago
0
Name datasets by species, not ID

#89 katrinleinweber closed 5 years ago
1
Consider using an XML parser with SAX capabilities

#88 katrinleinweber opened 5 years ago
0
Try ROpenSciLabs/roomba

#87 katrinleinweber opened 5 years ago
0
Add schema.org metadata?

#86 katrinleinweber opened 5 years ago
0
Dont test examples to speed up build process

#85 katrinleinweber closed 5 years ago
0
Number before "Data download..." message & warn_slow_download() afterwards

#84 katrinleinweber closed 5 years ago
2
Prevent running large examples in build process

#83 katrinleinweber closed 5 years ago
1
Try GitVersion to automate version numbering

#82 katrinleinweber opened 6 years ago
0
Use packrat

#81 katrinleinweber opened 6 years ago
1
WIP: Integrate codemeta.json

#80 katrinleinweber closed 5 years ago
1
Try performance profiling

#79 katrinleinweber closed 5 years ago
2
Validate retrieve_search_results() input

#78 katrinleinweber opened 6 years ago
1
Add devtools::spell_check() to makefile

#77 katrinleinweber closed 5 years ago
0
Diversify issue templates

#76 katrinleinweber opened 6 years ago
0
Add generic field extraction function

#75 katrinleinweber opened 6 years ago
0
Automate releases

#74 katrinleinweber opened 6 years ago
0
Enforce code style

#73 katrinleinweber closed 5 years ago
1
Implement better credentials storage system

#72 katrinleinweber opened 6 years ago
0