Teichlab cellphonedb issues

Teichlab / cellphonedb

MIT License

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issues

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Correcting for confounding factors

#334 Manikgarg opened 3 years ago
0
strict requirements

#333 igordot closed 2 years ago
3
Continuation of Fix #284 InvalidIndexError: Reindexing only valid with uniquely valued Index objects

#332 seigfried closed 3 years ago
1
Where is the count_network.txt file

#331 TehseusKunka closed 3 years ago
2
Could not run example data using conda

#330 wwn7268 closed 3 years ago
5
High version of sqlalchemy. sqlalchemy.exc.InvalidRequestError

#329 TehseusKunka closed 3 years ago
0
Why are the number of columns different from dataset to dataset?

#328 pikapika505 opened 3 years ago
0
"sqlite3.OperationalError: database is locked" when running "cellphonedb database generate"

#327 chenxing-zhang opened 3 years ago
0
single positional indexer is out-of-bounds

#326 singcell opened 3 years ago
3
why the count number are same for each two cluster in "count_network.txt" file

#325 siya-kk opened 3 years ago
1
How to build mouse

#324 mengchengyao closed 3 years ago
0
TypeError: Cannot interpret '<attribute 'dtype' of 'numpy.generic' objects>' as a data type

#323 zhongzheng1999 closed 3 years ago
9
receptor_a and receptor_b are the same True/False #122

#322 youarespecial opened 3 years ago
0
The count file for cellphonedb

#321 chengyuye opened 3 years ago
7
Custom interaction list resulting in KeyError: 'partner_a'

#320 sylvia-science closed 3 years ago
1
How to make the heatmap plot with row names in order?

#319 ilyiaZhao closed 3 years ago
2
error in Generating user-specific custom database

#318 Dragonlongzhilin opened 3 years ago
4
Minor additions before PR

#317 prete closed 3 years ago
0
cellphonedb plot dot_plot undefined columns selected

#316 brianpenghe opened 3 years ago
1
TypeError: memoryview: a bytes-like object is required, not 'list'

#315 brianpenghe closed 3 years ago
1
Download the result from website

#314 bioguy2018 closed 3 years ago
3
ValueError("Plan shapes are not aligned")

#313 kkamii opened 3 years ago
3
The barcodes changes when using data.frame

#312 chenxofhit closed 3 years ago
4
dot_plot figure parameters

#311 eijynagai closed 3 years ago
3
Why the results shows the same count from "source to target" and "target to source" ?

#310 siya-kk opened 3 years ago
1
No CellPhoneDB interacions found in this input

#309 pikapika505 closed 3 years ago
4
Error in read files

#308 tchen-tt closed 1 year ago
0
Minor typo in real percent analysis description

#307 rheofur opened 3 years ago
0
Invalid Counts data

#306 pikapika505 closed 3 years ago
6
Invalid counts data

#305 mpermanyer closed 3 years ago
9
Pvalues_results value error

#304 kevinmgao closed 3 years ago
6
Invalid Counts data

#303 howardchen0810 closed 3 years ago
12
Broken Pipe Errror

#302 YinCY123 closed 3 years ago
2
labels shown by string encoding

#301 yjgeno closed 3 years ago
5
bulk RNA-SEQ dataset

#300 bioguy2018 closed 3 years ago
3
No such command "plot".

#299 XinWang19 closed 3 years ago
5
low mean but very significant

#298 zhanglab2008 opened 3 years ago
2
module 'time' has no attribute 'clock'

#297 bioguy2018 closed 3 years ago
1
P-Value Thresholding for Dot-Plot

#296 aliciahillturner closed 3 years ago
2
The cellphonedb running weird error

#295 honghh2018 closed 3 years ago
6
Error: Invalid value for "--columns": Path "in/columns.txt" does not exist.

#294 aliciahillturner closed 3 years ago
2
Missing interaction pair

#293 balthasar0810 closed 3 years ago
2
"Error Invalid Counts Data"

#292 aliciahillturner closed 3 years ago
9
Error when generating dot plots with cellphone DB

#291 aliciahillturner closed 3 years ago
2
used in plant

#290 liuyongming0612 closed 3 years ago
1
Problem with plots

#289 algarji closed 3 years ago
5
Speed up permutation analysis

#288 nh3 closed 2 years ago
24
input file format

#287 ysu2015 closed 3 years ago
2
Cellphone is claiming that no functional R environment is installed

#286 HeinrichB87 closed 3 years ago
10
pandas.errors.ParserError in database generate

#285 jariwalask closed 3 years ago
4

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