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UPHL-BioNGS
/
Cecret
Reference-based consensus creation
MIT License
44
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22
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Add heatmap for snp-dists output
#198
DrB-S
closed
11 months ago
5
"ch_msa" error with --msa nextclade
#197
DrB-S
closed
11 months ago
3
Version check
#196
github-actions[bot]
closed
12 months ago
1
Version check
#195
github-actions[bot]
closed
12 months ago
0
Adding amplicon assessment images
#194
erinyoung
closed
11 months ago
0
Version check
#193
github-actions[bot]
closed
12 months ago
0
Combined fasta Issue
#192
whottel
closed
11 months ago
8
Update 2023 06 20
#191
erinyoung
closed
1 year ago
1
Version check
#190
github-actions[bot]
closed
1 year ago
0
Update dataset
#189
github-actions[bot]
closed
1 year ago
0
Add primer efficiency evaluation
#188
erinyoung
closed
11 months ago
2
Update 20230613
#187
erinyoung
closed
1 year ago
3
Version check
#186
github-actions[bot]
closed
1 year ago
0
Changed Freyja container to 1.4.3-20230606
#185
erinyoung
closed
1 year ago
0
Version check
#184
github-actions[bot]
closed
1 year ago
0
Add wastewater
#183
erinyoung
opened
1 year ago
0
Test Minimap2 version update
#182
erinyoung
closed
1 year ago
0
added script for freyja pie graphs
#181
erinyoung
closed
1 year ago
1
20230531 update
#180
erinyoung
closed
1 year ago
1
Version check
#179
github-actions[bot]
closed
1 year ago
0
freyja update
#178
erinyoung
closed
1 year ago
0
Version check
#177
github-actions[bot]
closed
1 year ago
0
Freyja variant pie chart
#176
erinyoung
closed
1 year ago
2
Minor Update
#175
erinyoung
closed
1 year ago
0
Version check
#174
github-actions[bot]
closed
1 year ago
0
Update dataset
#173
github-actions[bot]
closed
1 year ago
0
Config
#172
erinyoung
closed
1 year ago
0
mpx_idt profile
#171
tpillone
closed
1 year ago
2
Update freyja container to 1.4.2-2023-05-09
#170
erinyoung
closed
1 year ago
0
Version check
#169
github-actions[bot]
closed
1 year ago
1
Update 2023 05 02
#168
erinyoung
closed
1 year ago
0
Version check
#167
github-actions[bot]
closed
1 year ago
0
Error reading reads files
#166
DrB-S
closed
1 year ago
7
Update readme
#165
erinyoung
closed
1 year ago
0
Revert "Update freyja container"
#164
erinyoung
closed
1 year ago
1
Update freyja container
#163
erinyoung
closed
1 year ago
0
Version check
#162
github-actions[bot]
closed
1 year ago
0
Update dataset
#161
github-actions[bot]
closed
1 year ago
0
pipeline hangs up after multiqc
#160
kittychaseNC
closed
1 year ago
2
add back in ignore
#159
erinyoung
closed
1 year ago
0
Broken Hyperlink on Table of Content Introductions
#158
erinyoung
closed
1 year ago
0
Update 2023 04 18
#157
erinyoung
closed
1 year ago
0
Update dataset
#156
github-actions[bot]
closed
1 year ago
0
Update dataset
#155
github-actions[bot]
closed
1 year ago
0
Version check
#154
github-actions[bot]
closed
1 year ago
0
Add ivar version during consensus generation
#153
erinyoung
closed
1 year ago
0
Add warning for removed params.
#152
erinyoung
closed
1 year ago
0
Make readme easier to read
#151
erinyoung
closed
1 year ago
1
Add freyja update
#150
erinyoung
closed
1 year ago
1
Add fasta and multifasta to readme
#149
erinyoung
closed
1 year ago
1
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