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YuLab-SMU
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ggtree
:christmas_tree:Visualization and annotation of phylogenetic trees
https://yulab-smu.top/treedata-book/
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Cafe analysis
#573
Rhia15
opened
1 year ago
0
Heatmap colors are showing transparent when alpha is not used
#572
ireneortega
opened
1 year ago
1
DLL requires the use of native symbols
#571
msubirana
closed
5 months ago
0
How to get the coordinate of the nodes of a circular tree by ggtree
#570
ARise-fox
opened
1 year ago
0
Only one category appearing with geom_fruit
#569
JSSaini
opened
1 year ago
8
Not able to plot a daylight unrooted tree
#568
barizona
opened
1 year ago
4
`geom_tiplab2(geom="phylopic",...)`: errors
#567
bschilder
opened
1 year ago
1
`geom_tiplab2(geom="image",...)`: errors
#566
bschilder
opened
1 year ago
2
Control x-axis ticks on geom_fruit
#565
MaximePolicarpo
opened
1 year ago
2
read.beast does not exist
#564
elizeng
closed
1 year ago
2
plotting big tree error
#563
Asa12138
opened
1 year ago
1
Problem to use gheatmap with ggtree
#562
Fla1487
opened
1 year ago
0
geom_edgelab() for labeling edges?
#561
vinwol
opened
1 year ago
0
Unable to set colors and generate a legend for a ggtree plot based on Species
#560
uceleste
opened
1 year ago
0
Install issue
#559
osoyer
opened
1 year ago
2
Color coding tips and branches
#558
anzshahid
opened
1 year ago
1
How to add group information to nodes?
#557
xieduo7
opened
1 year ago
0
Changed branch length(hclust)
#556
mengchengyao
opened
1 year ago
1
NAs in compareCluster
#555
Shankav
opened
1 year ago
0
Issue with the attacher %<+%
#554
MaximePolicarpo
closed
1 year ago
0
problem_of_revts()
#553
Hong-Wun
opened
1 year ago
0
Have the branch fold backwards
#552
Cristinex
closed
1 year ago
0
scale_color_manual not working when geom_fruit (with geom = geom_boxplot) is used
#551
Suirotras
closed
1 year ago
2
Plotting interaction data / two phylogenies in gheatmap?
#550
maxfarrell
opened
1 year ago
0
using cli instead of warning_wrap
#549
xiangpin
closed
1 year ago
0
Depends were removed from ggplot2 version 3.4.0
#548
Baohua-Chen
opened
1 year ago
2
I cannot install ggtree in my Ubuntu [solved by following the solutions from post 544]
#547
shinysyk
opened
1 year ago
0
Update inset.R
#546
cmt2
closed
1 year ago
0
Some `layout` options cause error in ggtree()
#545
cmt2
opened
1 year ago
2
Unable to install ggtree_3.2.1: object 'warning_wrap' not found
#544
amizeranschi
closed
1 year ago
8
update ggtree to compatible with the ggplot2 3.4.0
#543
xiangpin
closed
1 year ago
0
flip tree function
#542
antoine4ucsd
closed
1 year ago
2
Installation error: Error in get(x, envir = ns, inherits = FALSE) : object 'warning_wrap' not found
#541
HenrikBengtsson
closed
1 year ago
2
Aligning tip labels in geom_tiplab results in error
#540
egonozer
closed
1 year ago
3
geom_hilight based on node name [&&NHX:S=CladeName]
#539
francicco
opened
1 year ago
1
as.treedata creating label.x and label.y columns in some cases
#538
nick-youngblut
closed
1 year ago
1
gheatmap cuts the top row and last column
#537
PSSchacksen
opened
1 year ago
0
data formatting for ggheatmap()
#536
nick-youngblut
opened
1 year ago
0
Expanded docs for geom_tiplab()
#535
nick-youngblut
opened
1 year ago
3
Error when trying to scale and collaps multiple clades on tree
#534
janstrauss1
opened
1 year ago
4
groupOTU adds an extra group called 0
#533
MarekGierlinski
opened
1 year ago
2
feature: ggrepel-style placement of inset annotations
#532
AlesBucek
opened
1 year ago
0
Heatmap with foldchange displayed
#531
suekn
closed
1 year ago
0
Unable to choose "encircle" for unrooted tree
#530
soneill93237
opened
1 year ago
1
how to draw stacked column chart
#529
ChenXi1201
closed
1 year ago
0
Issue with angled unrooted tree label
#528
PSSchacksen
opened
1 year ago
1
To better support the visualization of pvclust class using ggtree
#527
xiangpin
closed
1 year ago
0
update fortify for pvclust and hclust class-like
#526
xiangpin
closed
1 year ago
0
update fortify for pvclust
#525
xiangpin
closed
1 year ago
2
branch.length
#524
SolayMane
closed
1 year ago
5
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