ZW-xjtlu exomePeak2 issues

ZW-xjtlu / exomePeak2

Peak calling and differential methylation for MeRIP-Seq

25 stars 5 forks source link

issues

Newest

Newest Most commented Recently updated Oldest Least commented Least recently updated

Error in if (G[1] == 1) { : missing value where TRUE/FALSE needed

#50 zhengtingjin opened 4 weeks ago
3
Usage of ExomePeak2 for Bacterial & Viral m6A

#49 TaehyungKwon opened 5 months ago
1
exomePeak2运行出错

#48 tslzs closed 6 months ago
1
运行报错

#47 Zheng19w opened 7 months ago
2
Error in manager$availability[[as.character(result$node)]] <- TRUE : wrong args for environment subassignment

#46 junjunlab opened 8 months ago
2
apply exomePeak2 in m6a-seq2 with user-defined size factors

#45 yuanjianwen-gif opened 8 months ago
1
duplicate 'names(reads)' not allowed

#44 lbwfff opened 8 months ago
2
no @SQ lines in the header.

#43 JerryZhang-1222 opened 10 months ago
0
Run fail at "Identify background feature" step (+ most recent version of package installation?)

#42 TaehyungKwon closed 10 months ago
2
Introns in peak detection of RNA samples

#41 levuBGU opened 11 months ago
2
failing due to memory/"caught segment address (nil): cause 'unknown'"

#40 acurry-hyde closed 1 year ago
1
weird result with test_method=DESeq2

#39 ganzhuohui closed 1 year ago
1
Fix Bioconductor Build ERROR

#38 lshep opened 1 year ago
2
reference genome can't be recognized?

#37 ganzhuohui closed 1 year ago
1
peak location and reads count strands

#36 LoneKnightz opened 1 year ago
0
Calculate bin GC contents on exons ... Error in h(simpleError(msg, call))

#35 ganzhuohui closed 1 year ago
3
Error in Identify background with Gaussian Mixture Model

#34 PieraccioliM closed 1 year ago
1
diff peaks width are too long

#33 junjunlab opened 1 year ago
0
Differential Methylation Analysis

#32 levuBGU opened 1 year ago
0
关于exomePeak2的结果疑问

#31 wangkjkj opened 1 year ago
1
peak calling时log2FC的问题

#30 ShenziDeJiHua opened 1 year ago
1
不存在叫‘speedglm’这个名字的程辑包

#29 ShenziDeJiHua opened 1 year ago
1
使用exomePeak2进行差异分析时报错

#28 1JYL123 closed 1 year ago
0
exomePeak2报错

#27 hlldhy opened 1 year ago
0
使用exomePeak2进行peak calling时，程序被kill掉

#26 1JYL123 closed 1 year ago
1
whats next with the result (csv,bed,rds)

#25 AzkaSaleem opened 1 year ago
0
exomePeak2进行差异分析时报错

#24 jieyang2020 opened 1 year ago
1
关于exomePeak2的diff.log2.FC

#23 hlldhy opened 1 year ago
0
关于RMBase2.0

#22 JeremyQuo closed 1 year ago
0
含有生物学重复的差异peak分析

#21 wangkjkj opened 1 year ago
0
linux版本的参数少了很多

#20 gototry2000 opened 2 years ago
0
Calculate GC contents on exons ... Error in h(simpleError(msg, call))

#19 lulumagic7 opened 2 years ago
10
关于exomepeak2为什么没有选项使用spike-in进行normlize

#18 Renown-TAL opened 2 years ago
1
exomepeak2 运行三次重复，padj/ score值出现异常

#17 jiansong8811 opened 2 years ago
2
请教最新版exomePeak2 （1.7）报错

#16 ZehongW opened 2 years ago
10
Problem about strand information

#15 CTLife opened 2 years ago
1
Question about filters on Differential methylated peaks

#14 serpei opened 2 years ago
2
Question about blockCount

#13 Tinter7 opened 2 years ago
0
ERROR with 'XML'

#12 Sparkle-27 opened 3 years ago
2
基因组文件

#11 tan5251 opened 3 years ago
4
基因组文件

#10 tan5251 closed 3 years ago
0
Question about blockSizes and log2FoldChange

#9 jieyang2020 opened 3 years ago
2
output padj with many NAs

#8 sunhaifeng123 opened 3 years ago
2
请教：关于差异peaks的分析输出结果

#7 JieqiangHe opened 3 years ago
1
请教

#6 xieyy46 opened 3 years ago
2
您好，请问有已发表，或者预印版的文章吗

#5 ChristopherLeeZG opened 4 years ago
2
How to install

#4 liyan910117 closed 4 years ago
3
How to decide the fragment_length

#3 sunhaifeng123 opened 4 years ago
2
关于线程问题

#2 chenbt-hz closed 1 year ago
2
an error occured

#1 sunhaifeng123 opened 5 years ago
12