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adamewing
/
tldr
Identify and annotate TE-mediated insertions in long-read sequence data
MIT License
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Interpretation of the output files
#38
Machadum
opened
1 month ago
0
How to use the output from tldr
#37
rl4940
opened
2 months ago
1
wrote 0 records to TE.table.txt
#36
CWYuan08
opened
3 months ago
4
Insertion consensus letter-case
#35
maxfieldk
closed
2 months ago
1
Question about 'teref.human.fa' file
#34
gyuhee0928
closed
2 months ago
1
Could TLDR can detect the Germline TE?
#33
netwon123
closed
2 months ago
1
no PASS calls in human test data
#32
yuliamostovoy
opened
10 months ago
3
population analysis
#31
lunky-zao
opened
11 months ago
0
AttributeError: module '__main__' has no attribute '__spec__'
#30
raquelgarza
opened
1 year ago
4
struct.error: 'i' format requires -2147483648 <= number <= 2147483647
#29
adcosta17
opened
1 year ago
1
call_transductions
#28
alvinwt
opened
1 year ago
0
"NoneType" TypeError when clustering reads
#27
malonematt
opened
2 years ago
11
I've made a container for you
#26
SarahBeecroft
opened
2 years ago
0
Add Conda env file
#25
SarahBeecroft
closed
2 years ago
1
Finding non fully embedded reads
#24
mmisak
closed
2 years ago
2
[E::fai_build_core] Format error, unexpected "C" at line 1
#23
malonematt
closed
2 years ago
4
Difficulty recognizing BAM file?
#22
malonematt
closed
2 years ago
3
callmeth.sh header
#21
Coracollar
closed
2 years ago
3
Memory allocation
#20
eyalmpeer
opened
2 years ago
1
min read support
#19
daggoo
opened
2 years ago
2
tldr deal with longer chromosomes
#18
shangshanzhizhe
opened
2 years ago
2
Runing erro
#17
huangyuanf
closed
2 years ago
0
Install erro
#16
huangyuanf
opened
2 years ago
7
A problem of the output table file, the ALU family with the subfamily L1PA2
#15
Amz965
closed
3 years ago
3
wrote 0 records to *table.txt
#14
WeijiaSu
opened
3 years ago
7
Index Error on consensus adjustment
#13
shunhuahan
opened
3 years ago
6
Bug report for tablemeth_nonref.py
#12
sunyumail93
closed
3 years ago
2
python exception running tldr test
#11
blurdeblur
opened
3 years ago
1
Empty output of the .table.txt file
#10
sunyumail93
closed
3 years ago
12
Filter field without any 'PASS' flag
#9
gbdias
closed
3 years ago
1
Python: start out of range
#8
WeijiaSu
closed
3 years ago
3
LengthIns=0, "StartTE/EndTE" are "NA"
#7
WeijiaSu
closed
3 years ago
8
TypeError
#6
gbdias
closed
3 years ago
4
Argument not recognized --max_te_length
#5
gbdias
closed
3 years ago
3
[E::idx_find_and_load] Could not retrieve index file for '13'
#4
Coracollar
closed
3 years ago
7
Installing tldr
#3
Coracollar
closed
3 years ago
10
Choice of consensus sequences in teref.human.fa
#2
SegoleneDiry
closed
3 years ago
2
Possible issue with sort command prior to tabix compression
#1
Shians
closed
3 years ago
1