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ahmohamed
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lipidr
Data Mining and Analysis of Lipidomics datasets in R
https://www.lipidr.org/
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Add support for multilevel/mixed effects models
#62
marcora
opened
4 months ago
0
Names do not follow recommended pattern
#61
rustlab1
opened
8 months ago
0
Suggestion for Unsaturation analysis and chain length
#60
DavidGO464
opened
10 months ago
0
Maybe consider switching the colors in the plot_chain_distribution function?
#59
hleegwater
opened
10 months ago
0
Error in .check_sample_annotation(data, annot)
#58
mgaleas
opened
11 months ago
1
Volcano plot log2FoldChange
#57
DavidGO464
opened
11 months ago
1
annotate_lipids error
#56
gbaquer
opened
12 months ago
1
Finding the current version of lipidr + lipid names issue
#55
mphillips67
closed
1 year ago
0
Normalization - Log transformation
#54
semer94
opened
1 year ago
2
lipidR error when loading package
#53
Dagoshi85R
closed
1 year ago
1
Show labels on plot_mva
#52
mavino
closed
1 year ago
1
names not following the pattern 'CLS xx:x/yy:y
#51
czhu
closed
1 year ago
4
Problem when loading the lipidr library
#50
biga94
closed
1 year ago
2
add_sample_annotation
#49
DavidGO464
closed
1 year ago
2
Is normalization necessary for differential analysis?
#48
xiaowenchenjax
opened
1 year ago
0
Error when running
#47
kristinapedersen
closed
1 year ago
1
a question about lipid name
#46
xiaowenchenjax
closed
1 year ago
4
error in running the Vignette example
#45
ngoccalico
closed
1 year ago
9
could not find function "plot_enrichment"
#44
xiaowenchenjax
closed
1 year ago
1
Two factor analysis with interaction
#43
marcora
closed
1 year ago
3
Incorporating the multi-level experiments from Limma into Lipidr
#42
Ivan-vechetti
closed
1 year ago
9
Normalized?
#41
DavidGO464
closed
1 year ago
1
PCA loading plot
#40
rosanmar
closed
1 year ago
4
de_analysis, group_col names
#39
DavidGO464
closed
1 year ago
3
What kind of numeric measurements does as_lipidomics_experiment expect/assumes?
#38
marcora
closed
1 year ago
7
Issue with "as_lipidomics_experiment" function
#37
Rotimz
closed
1 year ago
4
Volcano plot eBayes f or t statistic
#36
annikaghub
closed
1 year ago
2
lipid name parsing for class(O+P-chain)
#35
Summer1019
closed
1 year ago
2
adding in package to .data_internal
#34
rmflight
closed
1 year ago
2
Issues Plotting
#33
donumanimae
closed
2 years ago
1
Batch effect
#32
DavidGO464
closed
1 year ago
1
Add annotation with numeric scores
#31
DavidGO464
closed
2 years ago
1
argument "uq_expr" is missing
#30
annikaghub
closed
2 years ago
2
cannot be installed in MacOS RStudio
#29
DavidGO464
closed
2 years ago
1
no TG nor DG in list
#28
jallebasi
closed
1 year ago
1
plot_molecules in vignette: colors for molecule and class do not match
#27
nilshoffmann
closed
1 year ago
1
LogFC calculations
#26
shubham7193
closed
1 year ago
2
Lipidr query
#25
shubham7193
closed
2 years ago
3
Question on the calculation of p values in volcano plots
#24
vastevenson
closed
2 years ago
1
Error in add_sample_annotation
#23
vastevenson
closed
2 years ago
4
Lipid Name Parsing for UCLA Core Mass Spec XLSX Report
#22
vastevenson
closed
2 years ago
3
296 non-parsed molecules
#21
chloemhall
closed
2 years ago
5
Dealing with multiple molecules with the same total chain length and unsaturation
#20
FernandoTobias
closed
2 years ago
3
Showing plot_chain_distribution(data) for multiple groups at the same time
#19
FernandoTobias
closed
3 years ago
2
lsea issue
#18
garodriguezblanco
closed
3 years ago
3
How to extract the area matrix?
#17
githubrudramani
closed
3 years ago
2
Showing only a subset of lipid classes in the full dataset
#16
FernandoTobias
closed
3 years ago
2
could not find function "plot_enrichment"
#15
FernandoTobias
closed
3 years ago
2
Can't make a lipiomics experiment due to lipid names
#14
gdmcdonald
closed
3 years ago
4
What is ACar?
#13
Lucianabarros
closed
3 years ago
1
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