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rep-cred
SW Tools Group - Repertoire Credibility Tool
Creative Commons Attribution 4.0 International
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Recpred suggestions
#41
bcorrie
opened
2 months ago
0
One more round of testing: T1D benchmark test
#40
bcorrie
opened
2 months ago
1
Repcred testing - performance on IGH
#39
bcorrie
opened
2 months ago
4
Fix warning "Node.js 16 actions are deprecated"
#38
ssnn-airr
closed
2 months ago
1
Repcred runs out of memory
#37
bcorrie
opened
2 months ago
8
Generate mark down error
#36
bcorrie
closed
2 months ago
2
Repcred testing - performance benchmarking
#35
bcorrie
opened
2 months ago
1
Repcred PDF report is not very pretty...
#34
bcorrie
opened
2 months ago
0
Repcred testing - Healthy Controls
#33
bcorrie
closed
2 months ago
2
repcred crashes with non-negative sequence length error.
#32
bcorrie
closed
2 months ago
14
update docs to fix @docType deprecation
#31
ssnn-airr
opened
3 months ago
2
Test study_id = PRJNA731610
#30
bcorrie
closed
4 months ago
1
Test study_id = E-MTAB-9995
#29
bcorrie
closed
2 months ago
5
repcred error on gene call frequency?
#28
bcorrie
closed
2 months ago
2
repcred failure on processing alleles
#27
bcorrie
closed
2 months ago
7
repcred failure with empty sequence_alignment
#26
bcorrie
closed
2 months ago
4
Add to `repcred.R` the option to use germline reference set
#25
ssnn-airr
opened
4 months ago
0
Add the option to output the report as a pdf
#24
ssnn-airr
closed
2 months ago
4
review reactivity, run only when 'Test Repertoire' clicked on.
#23
ssnn-airr
opened
1 year ago
0
Optional downsampling of rep for speed of report
#22
noahyannlee
closed
1 year ago
0
Create container
#21
ssnn-airr
opened
1 year ago
0
Stop processing if the repertoire file is not AIRR-C compliant
#20
ssnn-airr
closed
1 year ago
1
Make it easy to share reports
#19
williamdlees
opened
2 years ago
0
Full reports take a long time to run
#18
williamdlees
opened
2 years ago
1
Extended reports errored out
#17
williamdlees
opened
2 years ago
0
Warnings and errors are not always reflected in the UI
#16
williamdlees
opened
2 years ago
1
Parsing issues
#15
williamdlees
opened
2 years ago
0
Use of the germline set, and error when it is provided
#14
williamdlees
opened
2 years ago
0
Grey out unavailable sections in report contents
#13
williamdlees
opened
2 years ago
0
Improve non-nucleotides in sequence report
#12
williamdlees
opened
2 years ago
0
Quality control stats
#11
williamdlees
opened
2 years ago
0
Input parameters are not provided in the report
#10
williamdlees
closed
3 months ago
2
Error when re-running an analysis
#9
williamdlees
closed
1 year ago
2
Commenting and report changes.
#8
GeorginaLeslie
closed
2 years ago
0
Near final repcred code
#7
GeorginaLeslie
closed
2 years ago
0
set up Travis CI
#6
ssnn-airr
closed
4 years ago
3
Add CONTRIBUTING
#5
ssnn-airr
opened
4 years ago
0
Add usage examples to vignettes
#4
ssnn-airr
opened
4 years ago
0
Create Introduction for Vignette
#3
ssnn-airr
opened
4 years ago
0
Set up Read the Docs
#2
ssnn-airr
opened
4 years ago
7
Add to README text describing the goals of the package
#1
ssnn-airr
opened
4 years ago
0