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alan-turing-institute
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grace
Graph Representation Analysis for Connected Embeddings
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README & setup reversals
#338
KristinaUlicna
closed
1 year ago
0
[DEVELOPMENT] Consider using a KNN to construct the intial graph
#337
quantumjot
opened
1 year ago
0
[FEATURE REQUEST] Add citation.cff to repo
#336
mooniean
opened
1 year ago
0
[DEVELOPMENT] Compare IoU of inference datasets across multiple runs
#334
KristinaUlicna
opened
1 year ago
0
MILESTONE: Merging `development` into `main` 🎉
#333
KristinaUlicna
closed
1 year ago
1
Refactor node features ✍️
#332
KristinaUlicna
closed
1 year ago
1
Separate inference into assessment module 🧹
#331
KristinaUlicna
closed
1 year ago
1
[DEVELOPMENT] Concatenate Laplacian-multiplied node features
#330
KristinaUlicna
closed
1 year ago
0
Graph Laplacian 🌐
#329
KristinaUlicna
closed
1 year ago
0
Catch auroc error 🚫
#328
KristinaUlicna
closed
1 year ago
0
[DEVELOPMENT] AUROC metric throws an error
#327
KristinaUlicna
closed
1 year ago
1
Revitalise tests 🧪
#326
KristinaUlicna
closed
1 year ago
0
[DEVELOPMENT] Inject uncorrelated Gaussian noise into images
#325
KristinaUlicna
opened
1 year ago
0
[FEATURE REQUEST] Contribute a README.md describing augmentations
#324
KristinaUlicna
opened
1 year ago
0
Write a CONTRIBUTING.md doc 📝
#323
KristinaUlicna
opened
1 year ago
0
[DEVELOPMENT] Consider config validation to be a property of config
#322
KristinaUlicna
opened
1 year ago
0
[DEVELOPMENT] Create a function which strips the graph attributes from the GRACE files
#321
KristinaUlicna
opened
1 year ago
0
Re-implement graph / patch augmentation into the training loop
#320
KristinaUlicna
opened
1 year ago
0
[FEATURE REQUEST] Allow user to specify control which / how many edge properties they want
#319
KristinaUlicna
opened
1 year ago
0
[FEATURE REQUEST] Separate inference into a stand-alone module
#318
KristinaUlicna
closed
1 year ago
0
Tidy up `run.py` by separating inference into assessment module 🧹
#317
KristinaUlicna
closed
1 year ago
1
Catching `roc_auc_score` error 🚫
#316
KristinaUlicna
closed
1 year ago
2
[BUG] Undefined `roc_auc_score` if only one class present in `y_true`
#315
KristinaUlicna
closed
1 year ago
0
Revert "Issue closer 📕 "
#313
KristinaUlicna
closed
1 year ago
0
Issue closer 📕
#312
KristinaUlicna
closed
1 year ago
0
Minor comment to check for issue closing
#311
KristinaUlicna
closed
1 year ago
0
Clarify which properties are used in the training
#310
KristinaUlicna
closed
1 year ago
0
Testing project board workflow.
#309
crangelsmith
closed
1 year ago
0
Simplify `run.py` 🏃♀️
#308
KristinaUlicna
closed
1 year ago
3
Edge properties documentation 📜
#307
KristinaUlicna
closed
1 year ago
2
Model Architecture Summary 🏗️
#306
KristinaUlicna
closed
1 year ago
2
[DEVELOPMENT] Consider implementing an `RGCN`
#305
KristinaUlicna
opened
1 year ago
0
[DEVELOPMENT] Define an `EdgePropertyCruncher`
#304
KristinaUlicna
closed
1 year ago
0
[DEVELOPMENT] Compute edge properties
#303
KristinaUlicna
closed
1 year ago
0
Write up an extended abstract for introducing GRACE
#301
KristinaUlicna
opened
1 year ago
1
[FEATURE REQUEST] Create a discussion on metrics evaluation
#300
KristinaUlicna
closed
1 year ago
1
[DEVELOPMENT] Write proper documentation for `EdgePropertyCruncher`
#299
KristinaUlicna
closed
1 year ago
0
[DEVELOPMENT] Click options to overwrite config file hyperparameter specification
#298
KristinaUlicna
opened
1 year ago
0
[DEVELOPMENT] Allow feature / property extraction to be computed at run-time
#297
KristinaUlicna
closed
1 year ago
0
[BUG] Model architecture summary doesn't save up GNN layers by name
#296
KristinaUlicna
closed
1 year ago
0
Minor typo edits + typing specs
#295
KristinaUlicna
closed
1 year ago
0
[FEATURE REQUEST] Consider visualising the edge properties in the dataset
#294
KristinaUlicna
closed
1 year ago
0
Updating tests of an evolving pipeline ✍️
#293
KristinaUlicna
closed
1 year ago
0
Pytest: Automated tests refactoring ✍️
#292
KristinaUlicna
closed
1 year ago
1
Add more sophisticated classifier model options
#291
KristinaUlicna
closed
1 year ago
0
Automated tests refactoring ✍️
#290
KristinaUlicna
closed
1 year ago
2
Implement commented `features` code as an optional display in napari annotator
#289
KristinaUlicna
closed
1 year ago
0
Click.option with flexibility to show features in napari annotator 🎨
#288
KristinaUlicna
closed
1 year ago
0
Decide whether overwriting `.parquet` files is the best design approach
#287
KristinaUlicna
closed
1 year ago
0
Store graph `NODE_FEATURES` in the graph once for development 🌐
#286
KristinaUlicna
closed
1 year ago
0
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