andrew-edwards EDMsimulate issues

andrew-edwards / EDMsimulate

An R package for simulating fish populations for empirical dynamic modeling

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issues

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Papers to read

#20 andrew-edwards opened 1 month ago
0
Next: add pbsEDM::multivariate_simplex() to fit_models() and sim_and_fit_realisations()

#19 andrew-edwards opened 9 months ago
2
Need to get example working in `fit_models()`

#18 andrew-edwards opened 9 months ago
4
Can't quite get the parallel call to multiview_embedding working

#17 andrew-edwards opened 9 months ago
5
Should there be a check in `mve()` to make sure that the `response` argument with 0 lag is not included in the `lags`

#16 andrew-edwards opened 10 months ago
2
Check proper definition of MVE - see comments at top of pbsEDM::mve() and re-read the papers

#15 andrew-edwards closed 9 months ago
0
Save full time series of estimated R_t or R_prime_t in sim_and_fit_realisations()

#14 andrew-edwards closed 9 months ago
3
Carrie next steps

#13 carrieholt closed 9 months ago
1
Andy next steps

#12 andrew-edwards opened 11 months ago
0
slow run time

#11 carrieholt opened 11 months ago
0
performance of EDM vs Larkin and Ricker

#10 carrieholt opened 11 months ago
0
random error for recruitment deviations in salmon_sim.R and sim_and_fit_realisations.R

#9 carrieholt closed 11 months ago
1
Create duplicate (or new) tests for a population that does not die out

#8 andrew-edwards opened 1 year ago
2
Get sockeye-sim-edm.rnw working in report/ here with new movie format

#7 andrew-edwards closed 1 year ago
0
Figure out why simulation e431d0a9c blows up

#6 andrew-edwards closed 4 years ago
1
Generate simple simulation output by hand for a test

#5 andrew-edwards closed 1 year ago
0
Need to decide between prescribing omega or sigma_epsilon

#4 andrew-edwards closed 4 years ago
0
Work out some sensible parameter values and initial conditions

#3 andrew-edwards closed 4 years ago
2
Please try to clone and install this package

#2 andrew-edwards closed 1 year ago
1
Next steps

#1 andrew-edwards closed 3 years ago
1