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artic-network
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rampart
Read Assignment, Mapping, and Phylogenetic Analysis in Real Time
GNU General Public License v3.0
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Update environment.yml to pin "nodejs"
#116
Desperate-Dan
closed
2 weeks ago
0
Be able to provide a barcode to sample name mapping from a CSV/TSV file
#115
rambaut
opened
11 months ago
0
File watching doesn't work in Windows Subsystem for Linux
#114
rambaut
opened
11 months ago
0
Multiples genomes
#113
SergioBuenestadoSerrano
opened
1 year ago
1
Bump minimist, mkdirp, loader-fs-cache and handlebars
#112
dependabot[bot]
opened
1 year ago
0
Bump json5 from 1.0.1 to 1.0.2
#111
dependabot[bot]
opened
1 year ago
0
Bump express from 4.17.1 to 4.17.3
#110
dependabot[bot]
opened
1 year ago
0
Bump qs from 6.5.2 to 6.5.3
#109
dependabot[bot]
opened
1 year ago
0
Bump decode-uri-component from 0.2.0 to 0.2.2
#108
dependabot[bot]
opened
1 year ago
0
Bump engine.io and socket.io
#107
dependabot[bot]
opened
1 year ago
0
Bump loader-utils and react-scripts
#106
dependabot[bot]
opened
1 year ago
0
Bump socket.io-parser from 3.3.0 to 3.3.3
#105
dependabot[bot]
opened
1 year ago
0
Bump socket.io-parser from 3.3.0 to 3.3.2
#104
dependabot[bot]
closed
1 year ago
1
Bump @hapi/hoek from 8.5.0 to 8.5.1
#103
dependabot[bot]
opened
1 year ago
0
Bump d3-color from 1.4.0 to 3.1.0
#102
dependabot[bot]
opened
1 year ago
0
Bump terser from 4.4.2 to 4.8.1
#101
dependabot[bot]
opened
2 years ago
0
Bump eventsource from 1.0.7 to 1.1.1
#100
dependabot[bot]
opened
2 years ago
0
Bump async from 2.6.3 to 2.6.4
#99
dependabot[bot]
opened
2 years ago
0
Bump url-parse from 1.4.7 to 1.5.10
#98
dependabot[bot]
opened
2 years ago
0
Bump url-parse from 1.4.7 to 1.5.7
#97
dependabot[bot]
closed
2 years ago
1
Bump follow-redirects from 1.9.0 to 1.14.8
#96
dependabot[bot]
opened
2 years ago
0
Bump ajv from 6.10.2 to 6.12.6
#95
dependabot[bot]
opened
2 years ago
0
Bump handlebars from 4.5.3 to 4.7.7
#94
dependabot[bot]
opened
2 years ago
0
Bump follow-redirects from 1.9.0 to 1.14.7
#93
dependabot[bot]
closed
2 years ago
1
Latest release: v1.0.6 or v1.2.0?
#92
sassy-crick
closed
11 months ago
1
using the fastq.gz files demultiplexed
#91
josephhughes
closed
11 months ago
1
System limit for number of file watchers reached when using millions of reads
#90
jagos01
opened
3 years ago
1
under what coverage for a position there would be "N" in the consensus sequence?
#89
dinavb
closed
11 months ago
0
Add custom_barcodes to the annotationOptions config choices
#88
JudoWill
opened
3 years ago
1
how to translate from locations on the genomes in the VCF to the mutation in aa?
#87
dinavb
opened
3 years ago
0
showing different samples
#86
dinavb
closed
3 years ago
2
Bump socket.io from 2.2.0 to 2.4.0
#85
dependabot[bot]
closed
1 year ago
1
Feature request: add extra charts with read information using seqkit
#84
rmcolq
opened
3 years ago
0
Inclusion Native Barcoding 96 Expansion barcodes (ONT)
#83
menickname
closed
11 months ago
6
Seqkit backend and other improvements
#82
bsipos
closed
3 years ago
2
ncov2019 protocol version 3
#81
MaestSi
closed
4 years ago
1
Call snakemake with --cores argument
#80
jameshadfield
closed
4 years ago
0
improve display when no fastq data is available for a sample
#79
jameshadfield
closed
4 years ago
0
Made the number of threads used during mapping and demultiplexing configurable.
#78
bsipos
closed
4 years ago
0
FATAL ERROR: Ineffective mark-compacts near heap limit Allocation failed - JavaScript heap out of memory
#77
Psy-Fer
closed
4 years ago
6
Scale 'unassigned' barcode bar to be per sample
#76
rambaut
opened
4 years ago
1
Include a coverage heat-map above amplicon graphic for each sample
#75
rambaut
opened
4 years ago
0
Show coverage plot in summary panel
#74
rambaut
opened
4 years ago
0
Fastqs with the same name in different folders are excluded from analysis
#73
MaestSi
closed
4 years ago
9
Add --cores argument to snakemake calls
#72
jameshadfield
closed
4 years ago
5
Improve read lengths histogram x-axis domain
#71
jameshadfield
opened
4 years ago
0
Export Reads fails when there are unprocessed FASTQs on disk
#70
jameshadfield
opened
4 years ago
0
error in running the examples EBOV dataset
#69
micheledellab
closed
4 years ago
11
Allow fastqs to be gzipped
#68
jameshadfield
closed
4 years ago
0
Show coverage % in barchart at top
#67
rambaut
opened
4 years ago
0
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