issues
search
beast-dev
/
beast-mcmc
Bayesian Evolutionary Analysis Sampling Trees
http://beast.community
GNU Lesser General Public License v2.1
192
stars
73
forks
source link
issues
Newest
Newest
Most commented
Recently updated
Oldest
Least commented
Least recently updated
Issue with BEAUti GUI
#1008
samsledje
closed
6 years ago
1
beast 1.10.0 with java 10 on macos
#1007
msuchard
closed
6 years ago
3
starTreeLikelihood XML element does not parse
#1006
GuyBaele
closed
6 years ago
6
Support for AsymmetricQuadraticModel?
#1005
GuyBaele
closed
6 years ago
1
BEAUti fails to generate discrete GLM xmls
#1004
plemey
closed
6 years ago
1
Synchronize BEAST downloads for v1.10.1
#1003
GuyBaele
closed
6 years ago
1
bug beauti 1.10.0 setting GTR model
#1002
dbajpp0
closed
7 months ago
1
Import dates option in Tempest?
#1001
amilesj
closed
5 months ago
7
Make it abundantly clear that 'Parse calendar dates with variable precision' only uses ISO 8601
#1000
rambaut
closed
7 months ago
2
erroneous data specification when format is in yyyy-dd-mm
#999
bramvrancken
closed
6 years ago
3
change default prior on yule.birthRate
#998
GuyBaele
closed
6 years ago
1
Operator with name problem!
#997
ghost
closed
6 years ago
0
Check parser loading warning messages
#996
rambaut
closed
6 years ago
4
The -beagle_off command line option should be removed.
#995
rambaut
closed
6 years ago
2
1.10.0 "No acceptable BEAGLE library" despite -beagle_off
#994
ilovezfs
closed
6 years ago
7
Parsing error with BEAUTi-generated multilocus skygrid XML
#993
mdhall272
closed
6 years ago
0
Debug dump doesn't work with skygrid+covariates+BSSVS
#992
GuyBaele
opened
6 years ago
0
Remove StarBEAST-specifc code from BEAUti?
#991
rambaut
closed
6 years ago
0
bound at infinity for rootHeight prior in BEAUti
#990
GuyBaele
closed
6 years ago
3
Is up/down operator on rate/heights required?
#989
rambaut
closed
6 years ago
1
Cleaned up NoUTurnOperator.
#988
aki-nishimura
closed
6 years ago
0
Bug fix (?)
#987
aki-nishimura
closed
6 years ago
2
question marks and data type in BEAUti
#986
maxbiostat
closed
6 years ago
1
Long-standing store/restore issue ... or I am a fool chasing a ghost.
#985
msuchard
closed
6 years ago
11
treeLength tracked by default
#984
maxbiostat
closed
6 years ago
0
RW for clock quantiles had initial window size zero
#983
maxbiostat
closed
6 years ago
0
Relabel the 'posterior' column in log files?
#982
rambaut
closed
6 years ago
7
I can't open Beauti on my Mac
#981
julianaosse
closed
6 years ago
1
BEAUti won't create data set without dates
#980
maxbiostat
closed
6 years ago
0
Integrate OU
#979
pbastide
closed
6 years ago
0
Integrate OU
#978
pbastide
closed
6 years ago
1
Problem sampling from the prior with dev -- patterns block not being written out
#977
maxbiostat
closed
6 years ago
0
kc wasn't being written correctly
#976
maxbiostat
closed
6 years ago
1
Taxa panel unavailable in BEAUTi
#975
ctdarwell
closed
6 years ago
1
saving xml files
#974
antoine4ucsd
closed
6 years ago
1
Wrong deafult setting for microsatellite substitution models
#973
carlopacioni
closed
7 months ago
1
BEAUti XML generation fails
#972
GuyBaele
closed
6 years ago
3
Fixed local clock does not generate a prior for clock.rate
#971
GuyBaele
closed
6 years ago
0
GSS XML generation incorrect for fixed local clock model
#970
GuyBaele
closed
6 years ago
0
*KDEDistribution classes have large code duplication
#969
msuchard
opened
7 years ago
0
Microsoft Visual C++ Runtime Library Error when running BEAST
#968
MarineRobuchon
closed
6 years ago
4
BEAUti option to 'Reconstruct complete change history on tree' does not work
#967
plemey
closed
6 years ago
2
GLM Model
#966
antoine4ucsd
closed
6 years ago
1
The method addStatistic(Statistic) is undefined for the type ProductStatistic
#965
maxbiostat
closed
7 years ago
0
sorting only makes sense for large n; PS: does NOT tune correctly yet(?)
#964
maxbiostat
closed
7 years ago
0
Gibbs operator normalNormalMeanGibbsOperator returned a state with zero likelihood
#963
GuyBaele
closed
6 years ago
1
New stj
#962
maxbiostat
closed
7 years ago
0
fixing one more crass bug
#961
maxbiostat
closed
7 years ago
0
working on numerically stable normalisation; appears to work
#960
maxbiostat
closed
7 years ago
0
New stj -- does not work yet
#959
maxbiostat
closed
7 years ago
0
Previous
Next