beast-dev tracer issues

beast-dev / tracer

Posterior summarisation in Bayesian phylogenetics

https://beast.community/tracer

GNU Lesser General Public License v2.1

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issues

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JointDensityPanel null exception

#134 walterxie closed 6 years ago
1
ViolinPlot cannot handle trace having less than 3 values

#133 walterxie closed 6 years ago
3
Tracer is frozen after clicking Trace tab for a non-real type trace

#132 walterxie closed 6 years ago
2
Not possible to visualize >1 variable.

#131 bredelings closed 6 years ago
2
Log files with the same name cause issues with duplication of traces

#130 rambaut closed 6 years ago
1
Colours for trace file, trace file and trace not working

#129 rambaut closed 6 years ago
3
What to do with categorical values with frequency 0?

#128 GuyBaele opened 6 years ago
1
Add mean lines to violin plots

#127 rambaut opened 6 years ago
1
Joint-marginal integer/integer plots are now messed up

#126 rambaut closed 6 years ago
2
Error when performing Skygrid reconstruction

#125 GuyBaele closed 6 years ago
2
Long parameter names in joint marginal panel

#124 GuyBaele closed 3 years ago
1
Switching between trace files leads to selected parameter no longer being visible

#123 GuyBaele closed 3 years ago
1
Reloading trace file aligns the bottom visible parameter instead of the top visible parameter

#122 GuyBaele opened 6 years ago
0
Joint marginal for an Integer + Real only work if the Real is first

#121 bredelings closed 6 years ago
1
Joint Marginal for Integer + Real has overlapping labels on X axis.

#120 bredelings closed 6 years ago
1
Can't do a JointMarginal for two integers.

#119 bredelings closed 6 years ago
2
[Bug] Marginal Density sometimes fails with selecting an integer and a real statistic

#118 bredelings closed 6 years ago
0
[enhancement] Integer violin plots should space out labels

#117 bredelings closed 6 years ago
4
Density plots use same colours as traces

#116 rambaut closed 6 years ago
1
Can't find IntegerViolinPlot

#115 bredelings closed 7 years ago
2
Marginal density of multiple categorical variables

#114 rambaut closed 6 years ago
0
Add data export button to each plot/table

#113 rambaut closed 6 years ago
1
Joint marginal of Integer versus Real does not sort Integer labels

#112 bredelings closed 6 years ago
3
Continous density has negative axis

#111 rambaut closed 3 years ago
1
Implement all combinations of joint density

#110 rambaut closed 7 years ago
0
When viewing multiple categorical traces in Trace View, stack them.

#109 rambaut opened 7 years ago
0
Show multiple integer traces on summary page and density page

#108 rambaut closed 7 years ago
1
Show multiple discrete traces in Summary page/Density page.

#107 rambaut opened 7 years ago
0
new version of tracer for Mac

#106 antoine4ucsd closed 7 years ago
2
Trace plots for integer variables cannot be shown

#105 bredelings closed 7 years ago
4
Categorical traces - label ordering

#104 rambaut closed 7 years ago
1
refreshTraceList() in TracerFrame is called twice when clicking the reload button

#103 GuyBaele closed 7 years ago
1
Option to remove axis names when plotting to PDF would be useful

#102 GuyBaele opened 7 years ago
0
Statistic names are editable but won't actually accept a different name

#101 GuyBaele closed 7 years ago
1
Tracer reports increasing ESS values for constant parameter

#100 GuyBaele closed 6 years ago
10
Tracer freezes switching between trace files when manual axis range is set

#99 rambaut closed 7 years ago
1
Multiple binary traces are confusing in density plot

#98 rambaut closed 6 years ago
1
Selecting multiple categorical variable results in bar chart with different widths

#97 rambaut closed 7 years ago
0
Variance/covariance plots for continuous traits.

#96 rambaut closed 6 years ago
0
Provide some example log files for different types of data.

#95 rambaut closed 7 years ago
1
Joint density bubble plots where a dimension is non-binary shows erroneous tick labels

#94 rambaut closed 7 years ago
1
If multiple files are selected, allow joint density of 2 traces

#93 rambaut opened 7 years ago
0
If trace files have different types for a trace, combined trace permanently disappears.

#92 rambaut closed 7 years ago
1
Add heatmap for joint density of two discrete variables

#91 rambaut opened 7 years ago
0
Joint density bubble plot - white space if not square

#90 rambaut closed 7 years ago
2
Using the 'reload' button clears settings.

#89 rambaut closed 6 years ago
3
Cancelling the panel setup in violin plot causes the dialog box to reappear.

#88 rambaut closed 7 years ago
0
Controls at the bottom of Histogram and KDE are not appearing correctly

#87 rambaut closed 7 years ago
0
Create a Mac OS .dmg with a drag to Applications layout

#86 rambaut closed 6 years ago
1
Include JVM in Mac OS X package

#85 rambaut opened 7 years ago
0

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