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biocore
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American-Gut
American Gut open-access data and IPython notebooks
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nbviewer error
#218
Vivisanc
opened
5 years ago
0
Remove merge conflict strings
#217
ElDeveloper
closed
7 years ago
0
Help running module2_v1.0 notebook
#216
diffyy
closed
7 years ago
1
WIP: Justin's notebooks
#215
jwdebelius
opened
7 years ago
3
Adding unspecified to the list of unspecified body site
#214
josenavas
closed
8 years ago
1
Methods for running sparcc
#213
wasade
closed
8 years ago
3
Move prefix to suffix for alpha div
#212
squirrelo
closed
8 years ago
0
Improved the README file and pip_requirements
#211
iugrina
closed
8 years ago
0
Latest ipymd does not play well with ipython notebooks
#210
squirrelo
opened
8 years ago
1
Generate alpha diversity graphs for each metadata category of interest
#209
squirrelo
closed
6 years ago
20
Generate taxa by summary data
#208
squirrelo
closed
8 years ago
8
Adding EBI pulldown script
#207
josenavas
opened
8 years ago
7
Creation of 18S processing notebooks
#206
EmbrietteH
opened
8 years ago
0
Converts alpha diversity to serial
#205
jwdebelius
closed
8 years ago
1
The way American-Gut repo was intended to be used?
#204
iugrina
closed
8 years ago
5
conda_req and pip_req differences
#203
iugrina
closed
8 years ago
6
Updates so assert cells raise errors
#202
jwdebelius
closed
8 years ago
4
Create readme.md
#201
jladau
closed
8 years ago
0
Readme updated
#200
jwdebelius
closed
8 years ago
10
install trouble - conflicting ipython requirements
#199
cssmillie
closed
8 years ago
11
WIP: Adding in picrust
#198
mortonjt
closed
8 years ago
2
Makes alpha diveristy images PNGs
#197
jwdebelius
closed
8 years ago
4
Generate PNG instead of PDF for per-sample-results
#196
squirrelo
closed
8 years ago
4
Creates Data handling Class
#195
jwdebelius
closed
8 years ago
0
Creates Question Object for continuous data
#194
jwdebelius
closed
8 years ago
0
Creates Boolean Question Object
#193
jwdebelius
closed
8 years ago
0
Categorical Question Object
#192
jwdebelius
closed
8 years ago
0
ENH: distance decay notebook by Ashkaan
#191
wasade
opened
8 years ago
0
Demographics
#190
jwdebelius
closed
8 years ago
1
Creates a notebook summarizing data
#189
jwdebelius
closed
8 years ago
1
Creates the question object
#188
jwdebelius
closed
8 years ago
1
Unboundlocalbug
#187
wasade
closed
8 years ago
1
Analysis Summary Pipeline
#186
jwdebelius
closed
8 years ago
0
Per sample alpha plots
#185
jwdebelius
closed
8 years ago
6
add Unknown to unspecified body site list
#184
EmbrietteH
closed
8 years ago
1
BLD: Updating travis.yml to allow for longer run times
#183
mortonjt
closed
8 years ago
3
Introduces the single bodysite notebook
#182
jwdebelius
closed
8 years ago
9
Fix font size for rare taxa list
#181
EmbrietteH
closed
8 years ago
6
Conflicting Python resources and virtualenvs
#180
jwdebelius
closed
8 years ago
8
WIP: Create Alpha Diversity violin plot code
#179
jwdebelius
closed
8 years ago
1
Fixes from #175
#178
mortonjt
closed
8 years ago
2
WIP: Do the 10k
#177
wasade
closed
8 years ago
6
Fixes the double SampleID Column
#176
jwdebelius
closed
8 years ago
2
blanks are special again
#175
wasade
closed
8 years ago
8
tweaks
#174
wasade
closed
8 years ago
3
WIP: 10 participant results
#173
wasade
closed
8 years ago
2
Update to fetch study
#172
mortonjt
closed
8 years ago
3
Adding in setup.py
#171
mortonjt
closed
8 years ago
6
9 per participant results
#170
wasade
closed
8 years ago
2
8 collapse samples
#169
wasade
closed
8 years ago
4
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