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biocore
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American-Gut
American Gut open-access data and IPython notebooks
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7 taxonomy summaries
#168
wasade
closed
8 years ago
4
6 beta diversity
#167
wasade
closed
8 years ago
2
5 alpha diversity
#166
wasade
closed
8 years ago
9
4 prepare metaanalyses
#165
wasade
closed
8 years ago
7
pick the otus
#164
wasade
closed
8 years ago
4
filter sequences for blooms
#163
wasade
closed
8 years ago
5
1 get sequences and metadata
#162
wasade
closed
8 years ago
7
Primary processing revitalized
#161
wasade
closed
7 years ago
1
WIP: Preprocessing revitalized
#160
wasade
closed
8 years ago
18
Metadata clean up
#159
mortonjt
closed
8 years ago
1
metaclean
#158
mortonjt
closed
8 years ago
0
metadata clean
#157
mortonjt
closed
8 years ago
0
Subsample mod2
#156
wasade
closed
8 years ago
3
Subsampled figure2
#155
wasade
closed
8 years ago
1
Dump sample - accession mappings, and update for r1-15
#154
wasade
closed
9 years ago
2
Skin/oral new pcoas
#153
cuttlefishh
closed
9 years ago
0
ENH: output, specify samples, file prefixes
#152
wasade
closed
8 years ago
4
Re-adding taxonomy
#151
wasade
closed
9 years ago
2
All new PCoAs and legends for bottom half of Module 2 report, includi…
#150
cuttlefishh
closed
9 years ago
41
Adding data dictionary
#149
wasade
closed
8 years ago
4
Creates a contributing.md document
#148
jwdebelius
opened
9 years ago
17
We need a contributing.md document
#147
jwdebelius
opened
9 years ago
0
Mislabeled metadata
#146
mortonjt
closed
8 years ago
2
Cannot import biom file in R
#145
arcys
closed
8 years ago
7
Picrust
#144
mortonjt
closed
9 years ago
14
r1-15 data
#143
wasade
closed
9 years ago
4
Gradient legend maker
#142
wasade
closed
9 years ago
1
HMP table does not have taxonomy
#141
wasade
closed
8 years ago
1
Updates table of contents and downloads
#140
jwdebelius
closed
9 years ago
3
Add .travis.yml
#139
adamrp
closed
9 years ago
9
Add Travis CI
#138
adamrp
closed
9 years ago
0
Jsonized taxonomy results
#137
wasade
closed
9 years ago
5
Updating shared_otus notebook...
#136
josenavas
closed
9 years ago
8
The shared_otus ipynb tries to download a file that no longer exists
#135
josenavas
closed
9 years ago
1
Beyond bacteria text
#134
wasade
closed
9 years ago
1
Adds images
#133
jwdebelius
closed
9 years ago
5
Subset and failed
#132
wasade
closed
9 years ago
1
Add zeroes to barcodes in mapping files
#131
adamrp
closed
9 years ago
5
Zeros truncated in AG data mapping file
#130
jwdebelius
closed
9 years ago
5
Added sample/accession mappings for r1-14
#129
wasade
closed
9 years ago
5
Easy template
#128
jwdebelius
closed
8 years ago
2
Statistical power
#127
jwdebelius
closed
9 years ago
31
Preprocessing notebook
#126
jwdebelius
closed
9 years ago
15
Ipython support scripts
#125
jwdebelius
closed
9 years ago
0
Adding Beyond Bacteria credits
#124
wasade
closed
9 years ago
0
Filtering notebook
#123
wasade
closed
9 years ago
12
Latex module1
#122
cuttlefishh
closed
9 years ago
1
Power
#121
jwdebelius
closed
9 years ago
17
Preprocessing
#120
jwdebelius
closed
9 years ago
9
Scripts update
#119
jwdebelius
closed
9 years ago
0
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