biocore q2-qemistree issues

biocore / q2-qemistree

Hierarchical orderings for mass spectrometry data. Canonically pronounced "chemis-tree".

BSD 2-Clause "Simplified" License

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issues

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Syntax errors in _fingerprint.py

#158 Samiloffe opened 5 months ago
1
Error with command qiime qemistree make-hierarchy

#157 anani-a-missinou opened 6 months ago
3
Is qemistree working at the moment?

#156 typewritermonkey opened 7 months ago
0
Update Qemistree - Sirius 5

#155 helenamrusso opened 1 year ago
2
predict-fingerprints takes so much time, it is normal?

#154 ebervilla opened 1 year ago
4
Do the GNPS website for Qemistree not works now?

#153 kechen1984 opened 1 year ago
2
Plugin error from qemistree: [Errno 2] No such file or directory: '/tmp/qiime2-archive-jo4eaqoo/881ea900-5aef-49db-9408-d5edb694d63d/data/csi-output

#152 YUANMY2021 opened 2 years ago
2
running the demo pipeline

#151 MuBulut closed 2 years ago
2
Updated codes for Sirius 4.8.2

#150 helenamrusso closed 2 years ago
3
Wighted vs unweighted UniFrac strong difference

#149 ArnaudGaudry opened 2 years ago
3
Update plugin_setup.py

#148 helenamrusso closed 2 years ago
0
Update _fingerprint.py

#147 helenamrusso closed 2 years ago
4
Update _process_fingerprint.py

#146 helenamrusso closed 2 years ago
1
Updating Qemistree so it runs from SIRIUS workspace and generic input files

#145 lfnothias opened 3 years ago
6
Update maxmz range in compute fragmentation trees

#144 anupriyatripathi closed 3 years ago
0
Maximum m/z in compute-fragmentation-trees

#143 helenamrusso closed 2 years ago
1
install Qemistree error

#142 jeep3 opened 3 years ago
1
installing with conda

#141 YiJessePi closed 3 years ago
1
New release

#140 anupriyatripathi closed 3 years ago
1
Remove the plot action in favor of q2-empress

#139 ElDeveloper closed 3 years ago
0
iTOL API requires key

#138 askerdb closed 3 years ago
3
Tree generation on molecular formulas alone

#137 mortonjt opened 3 years ago
0
Update source to the latest version of Sirius 4.4.29+

#136 anupriyatripathi closed 2 years ago
2
Classyfire updates

#135 anupriyatripathi closed 4 years ago
1
Use consistent code for TSVMolecules -> Metadata transformer as for TSVMolecules -> DataFrame transformer

#134 fedarko closed 4 years ago
3
update classyfire API

#133 anupriyatripathi closed 3 years ago
0
Pie chart support

#132 anupriyatripathi closed 2 years ago
0
Adds MGF file validation on import

#131 ElDeveloper closed 3 years ago
1
make plot importable

#130 anupriyatripathi closed 4 years ago
0
Add QC module

#129 anupriyatripathi opened 4 years ago
3
revise fingerprint defaults based on SIRIUS specifications

#128 anupriyatripathi closed 3 years ago
0
Classyfire updates

#127 anupriyatripathi closed 4 years ago
0
modify stephs doc PR

#126 anupriyatripathi closed 4 years ago
0
Gfop fixes

#125 anupriyatripathi closed 4 years ago
1
add FEATUREDATA.md

#124 anupriyatripathi opened 4 years ago
0
add feature id to tree tips

#123 anupriyatripathi opened 4 years ago
0
Updated the README.md file to have instructions on how to use the new plot plugin

#122 stephramos17 closed 4 years ago
2
Clusterinfo

#121 anupriyatripathi closed 4 years ago
1
make feature table normalization optional

#120 anupriyatripathi closed 4 years ago
1
replaces nans with 'missing'

#119 anupriyatripathi closed 4 years ago
1
BUG: Fix a downloading bug

#118 ElDeveloper closed 4 years ago
0
tsv to txt

#117 anupriyatripathi closed 4 years ago
0
tackle cases when quant table has some missing tips compared to sirius export

#116 anupriyatripathi closed 3 years ago
0
Barplots

#115 anupriyatripathi closed 4 years ago
0
BUG: Fix problem with error message

#114 ElDeveloper closed 4 years ago
0
Remove the usage of np.nan for missing values

#113 ElDeveloper closed 4 years ago
0
Feature data

#112 anupriyatripathi closed 4 years ago
0
add barplot support to qemistree plot module

#111 anupriyatripathi closed 4 years ago
0
disambiguate header names in feature data

#110 anupriyatripathi closed 4 years ago
0
disable repeated color warning when color file path is not specified

#109 anupriyatripathi closed 4 years ago
1