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biocore
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q2-qemistree
Hierarchical orderings for mass spectrometry data. Canonically pronounced "chemis-tree".
BSD 2-Clause "Simplified" License
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Syntax errors in _fingerprint.py
#158
Samiloffe
opened
8 months ago
1
Error with command qiime qemistree make-hierarchy
#157
anani-a-missinou
opened
9 months ago
3
Is qemistree working at the moment?
#156
typewritermonkey
opened
10 months ago
0
Update Qemistree - Sirius 5
#155
helenamrusso
opened
1 year ago
2
predict-fingerprints takes so much time, it is normal?
#154
ebervilla
opened
1 year ago
4
Do the GNPS website for Qemistree not works now?
#153
kechen1984
opened
2 years ago
2
Plugin error from qemistree: [Errno 2] No such file or directory: '/tmp/qiime2-archive-jo4eaqoo/881ea900-5aef-49db-9408-d5edb694d63d/data/csi-output
#152
YUANMY2021
opened
2 years ago
2
running the demo pipeline
#151
MuBulut
closed
2 years ago
2
Updated codes for Sirius 4.8.2
#150
helenamrusso
closed
2 years ago
3
Wighted vs unweighted UniFrac strong difference
#149
ArnaudGaudry
opened
3 years ago
3
Update plugin_setup.py
#148
helenamrusso
closed
3 years ago
0
Update _fingerprint.py
#147
helenamrusso
closed
3 years ago
4
Update _process_fingerprint.py
#146
helenamrusso
closed
3 years ago
1
Updating Qemistree so it runs from SIRIUS workspace and generic input files
#145
lfnothias
opened
3 years ago
6
Update maxmz range in compute fragmentation trees
#144
anupriyatripathi
closed
3 years ago
0
Maximum m/z in compute-fragmentation-trees
#143
helenamrusso
closed
3 years ago
1
install Qemistree error
#142
jeep3
opened
3 years ago
1
installing with conda
#141
YiJessePi
closed
3 years ago
1
New release
#140
anupriyatripathi
closed
3 years ago
1
Remove the plot action in favor of q2-empress
#139
ElDeveloper
closed
3 years ago
0
iTOL API requires key
#138
askerdb
closed
3 years ago
3
Tree generation on molecular formulas alone
#137
mortonjt
opened
3 years ago
0
Update source to the latest version of Sirius 4.4.29+
#136
anupriyatripathi
closed
2 years ago
2
Classyfire updates
#135
anupriyatripathi
closed
4 years ago
1
Use consistent code for TSVMolecules -> Metadata transformer as for TSVMolecules -> DataFrame transformer
#134
fedarko
closed
4 years ago
3
update classyfire API
#133
anupriyatripathi
closed
4 years ago
0
Pie chart support
#132
anupriyatripathi
closed
2 years ago
0
Adds MGF file validation on import
#131
ElDeveloper
closed
4 years ago
1
make plot importable
#130
anupriyatripathi
closed
4 years ago
0
Add QC module
#129
anupriyatripathi
opened
4 years ago
3
revise fingerprint defaults based on SIRIUS specifications
#128
anupriyatripathi
closed
4 years ago
0
Classyfire updates
#127
anupriyatripathi
closed
4 years ago
0
modify stephs doc PR
#126
anupriyatripathi
closed
4 years ago
0
Gfop fixes
#125
anupriyatripathi
closed
4 years ago
1
add FEATUREDATA.md
#124
anupriyatripathi
opened
4 years ago
0
add feature id to tree tips
#123
anupriyatripathi
opened
4 years ago
0
Updated the README.md file to have instructions on how to use the new plot plugin
#122
stephramos17
closed
4 years ago
2
Clusterinfo
#121
anupriyatripathi
closed
4 years ago
1
make feature table normalization optional
#120
anupriyatripathi
closed
4 years ago
1
replaces nans with 'missing'
#119
anupriyatripathi
closed
4 years ago
1
BUG: Fix a downloading bug
#118
ElDeveloper
closed
4 years ago
0
tsv to txt
#117
anupriyatripathi
closed
4 years ago
0
tackle cases when quant table has some missing tips compared to sirius export
#116
anupriyatripathi
closed
4 years ago
0
Barplots
#115
anupriyatripathi
closed
4 years ago
0
BUG: Fix problem with error message
#114
ElDeveloper
closed
4 years ago
0
Remove the usage of np.nan for missing values
#113
ElDeveloper
closed
4 years ago
0
Feature data
#112
anupriyatripathi
closed
4 years ago
0
add barplot support to qemistree plot module
#111
anupriyatripathi
closed
4 years ago
0
disambiguate header names in feature data
#110
anupriyatripathi
closed
4 years ago
0
disable repeated color warning when color file path is not specified
#109
anupriyatripathi
closed
4 years ago
1
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