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bioinfo-pf-curie
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TMB
Tumor Mutational Burden
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Warning : given vaf >> vaf in config. wrong vaf threshold ?
#24
dbhayal9
opened
1 month ago
3
Nservant patch 1
#23
nservant
closed
5 months ago
0
Issue in creating config.yml file for vep annotated vcf file
#22
Raghu9721
opened
8 months ago
2
`--filterLowQual` does not work
#21
bounlu
opened
8 months ago
2
Configuration file for Ensembl VEP
#20
MGCarta
opened
8 months ago
1
correct description for `--minMapq` argument
#19
bounlu
closed
8 months ago
0
pyEffGenomeSize throws error - single positional indexer is out-of-bounds
#18
jpcartailler
opened
11 months ago
0
Typo
#17
rhagenson
closed
5 months ago
1
BED file header
#16
nservant
opened
1 year ago
0
An error is reported while running
#15
huilin-al
opened
1 year ago
1
pyEffGenomeSize.py error
#14
wt12318
closed
1 year ago
2
How to use for WGS data
#13
praveenraj2018
closed
1 year ago
2
Usage question on databases.yml and calling.yml
#12
FriederikeHanssen
closed
2 years ago
1
Add to conda
#11
FriederikeHanssen
closed
1 year ago
0
Minimum alternative allele depth
#10
HMR24
opened
2 years ago
1
how to use snpeff annotation with databases gnomAD,1K
#9
user-tq
opened
2 years ago
3
Is the VEP annotated vcf supported?
#8
gudeqing
closed
5 months ago
1
Which bed file should be used for input.
#7
lincj1994
closed
2 years ago
1
vcf file contains two sample
#6
wangdepin
opened
3 years ago
2
FileNotFoundError: [Errno 2] No such file or directory: 'pyeffg.intersect.bed'
#5
deb0612
opened
3 years ago
6
The format of input
#4
deb0612
opened
3 years ago
1
sys.stderr.write("Error: " + len(vcf.samples)
#3
deb0612
opened
3 years ago
3
Filtres coding / Non coding
#2
Ephedria
opened
3 years ago
4
Filtre LowQual trop stringent
#1
tomgutman
opened
3 years ago
0