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bjornwallner
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DockQ
DockQ is a single continuous quality measure for protein docked models based on the CAPRI evaluation protocol
MIT License
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Enable loading a PDB file from an open file handle
#38
emarsden-iso
opened
2 weeks ago
0
bug in parsing of irregular aa names
#37
clami66
closed
2 weeks ago
0
Parser.py has some issues
#36
jaideepm009
closed
2 weeks ago
9
missing model ID in cif parsing
#35
clami66
closed
3 weeks ago
0
CIFs don't seem to work properly
#34
nzrandol
closed
3 weeks ago
4
Grouping chains (receptor and ligand) for evaluation
#33
heol1
opened
3 weeks ago
7
Python/pip version
#32
Luke-ebbis
closed
1 month ago
2
pocket aligned lrmsd
#31
clami66
closed
1 month ago
0
Can two slightly different （length）sequence be allplied to DockQ algorithm?
#30
Ming-Qin-tech
closed
1 month ago
4
np.dot(ligand_atoms_sample, rot) error.
#29
luwei0917
closed
1 month ago
1
DockQ error
#28
andregiuseppecavalli
closed
3 weeks ago
3
Pip Install Issue
#27
EureKaZhu
closed
3 weeks ago
2
inconsistent results
#26
luwei0917
closed
1 month ago
6
Get symmetry-corrected LRMSD for small molecules
#25
clami66
closed
1 month ago
0
DockQ v2.0
#24
clami66
closed
2 months ago
0
fnat error
#23
halg3
closed
2 months ago
0
fixed #21
#22
alirezaomidi
closed
3 months ago
0
Bug in aligning model to native (cython branch)
#21
alirezaomidi
closed
4 months ago
1
[cython branch] Value error when using -perm1 -perm2 flags
#20
samuelfromm
closed
4 months ago
1
I got KeyError: 'A'
#19
partrita
closed
7 months ago
0
cannot install emboss and cannot find "which needle"
#18
rocke2020
closed
6 months ago
1
Script fixnumbering.pl does not output model.pdb.fixed
#17
JasperGeissler
closed
2 months ago
10
DockQ.py incorrectly calculating iRMS
#16
kaymccoy
closed
2 months ago
2
IndexError: list index out of range
#15
kaymccoy
closed
2 months ago
4
Receptor as the smaller molecule
#14
brianjimenez
closed
2 months ago
0
How to align chain ID of two complexes before running DockQ?
#13
nonononanana
closed
2 months ago
1
Chain mismatch , KeyError: 'A'
#12
nonononanana
closed
2 months ago
3
biopython version
#11
zjq101
closed
2 months ago
0
Chain size limitations?
#10
gtauriello
closed
2 months ago
0
PermissionError: [WinError 32]
#9
kristianwant
closed
2 months ago
2
Multichain functionality in readme
#8
chaotify3317
closed
2 months ago
3
Trying to run Readme example, issues with make command
#7
chaotify3317
closed
2 years ago
2
Readme:./DockQ.py <model> <native>
#6
Kaixiang-Wang
closed
2 months ago
9
AssertionError: Zero number of equivalent atoms in native and model ligand (chain B) 0 0.
#5
daniel1991zy
closed
2 months ago
3
Running Readme Example
#4
YomnaJehad
closed
2 months ago
2
Add a missing include and fix mismatching arg name
#3
Augustin-Zidek
closed
2 years ago
0
run in python2 and python3
#2
Downchuck
closed
3 months ago
1
Make Python 3 compatible
#1
sixpi
closed
3 months ago
0