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bjpop
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methpat
A program for summarising CpG methylation patterns
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Update documentation for .tsv file
#29
retrogenomics
opened
7 years ago
0
Possibility to export methylation graphs in a vectorial format instead of png
#28
retrogenomics
opened
7 years ago
0
Possibility to label positions with negative coordinates
#27
retrogenomics
opened
7 years ago
0
Possibility to rotate the whole report
#26
retrogenomics
opened
7 years ago
0
Add paper citation to documentation
#25
bjpop
opened
8 years ago
0
Possible to filter reads with partial coverage
#24
timp0
closed
8 years ago
19
Fix visualisation bug which makes the SVG too narrow when the number of patterns is small
#23
bjpop
closed
9 years ago
0
mouse over to identify read identifier or list of identifiers
#22
methylnick
closed
9 years ago
2
default colour schema
#21
methylnick
closed
9 years ago
1
--dump_reads option
#20
methylnick
closed
9 years ago
1
Update README.md
#19
methylnick
closed
10 years ago
0
Histogram of methylation abundance for each CpG site on side of patterns
#18
bjpop
closed
9 years ago
1
methylation site direction sort and histogram redrawing
#17
methylnick
closed
9 years ago
3
change default display settings
#16
methylnick
closed
10 years ago
1
Make javascript dependencies more robust
#15
bjpop
closed
10 years ago
1
Python 3.x version and document 2.7 dependency
#14
bjpop
opened
10 years ago
0
Add axes titles to the histogram
#13
bjpop
closed
10 years ago
2
Export SVG images to file
#12
bjpop
closed
10 years ago
4
display on or off
#11
methylnick
closed
10 years ago
1
Allow methylation patterns to be sorted by degree of methylation in addition to the current sorting on frequency of allele
#10
bjpop
closed
10 years ago
1
scale axes? so they are all comparable
#9
methylnick
closed
10 years ago
2
Show amplicon meta data in better way
#8
bjpop
closed
9 years ago
2
Allow order of plots to be changed on page
#7
bjpop
closed
9 years ago
1
Show axes on histogram
#6
bjpop
closed
10 years ago
1
Histogram scale: raw count, log count, percentage of total reads
#5
bjpop
closed
10 years ago
1
Allow histogram to be above or below the methylation patterns
#4
bjpop
closed
10 years ago
1
Bump version number
#3
bjpop
closed
10 years ago
1
Make colours selectable on the page
#2
bjpop
closed
10 years ago
1
Added DemoData folder containing files required to run methpat, another ...
#1
methylnick
closed
10 years ago
0