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bnprks
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BPCells
Scaling Single Cell Analysis to Millions of Cells
https://bnprks.github.io/BPCells
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Ia/matrix projections lsi
#162
immanuelazn
opened
3 days ago
0
[r] Add draft manuscript links to README
#161
bnprks
closed
6 days ago
0
Different gene expression count values when converting BPCells matrix
#160
sbt2024
opened
1 week ago
3
Update docs for commit: Python PyPI deploy setup (#121)
#159
github-actions[bot]
opened
1 week ago
0
[r] add poc matrix projection interface
#158
immanuelazn
opened
1 week ago
0
Update docs for commit: [r] Add R-universe link in README (#154)
#157
github-actions[bot]
closed
2 weeks ago
0
[r] add lsi, var feature selection
#156
immanuelazn
opened
2 weeks ago
2
Code Signing Error when loading the binary version of BPCells v0.2 (BPCells_0.2.0.tgz(r-4.4-arm64))
#155
akhst7
closed
2 weeks ago
2
[r] Add R-universe link in README
#154
bnprks
closed
2 weeks ago
0
BPcells cannot load multiple assay layers from h5ad file?
#153
fingeram
closed
2 weeks ago
2
[r] Fix leiden tests in CI
#152
bnprks
closed
3 weeks ago
1
Update docs for commit: [r] Adjust default parameters for `cluster_graph_leiden()` (#147)
#151
github-actions[bot]
closed
3 weeks ago
0
[r] Fix awk typo in configure error message
#150
bnprks
closed
3 weeks ago
0
Potential "awk" bug
#149
akhst7
closed
2 weeks ago
5
Installation issue: fatal error: 'hwy/highway.h' file not found
#148
korMichi
closed
3 weeks ago
3
[r] Adjust default parameters for `cluster_graph_leiden()`
#147
bnprks
closed
3 weeks ago
2
Add AnnData dense matrix read support
#146
bnprks
opened
4 weeks ago
1
Problem running with Visium HD spatial Data
#145
salasd
opened
4 weeks ago
1
[r] add automatic website building
#144
immanuelazn
closed
3 weeks ago
5
[r] Change default insertion mode for macs peak calling, rename function
#143
immanuelazn
closed
3 weeks ago
4
Simple Operations on matrices: max, min, range etc.
#142
Artur-man
opened
1 month ago
4
Fix broken Mac build and add CI checks
#141
bnprks
closed
3 weeks ago
1
error install BPCells, no matching function for call to 'min'
#140
hpsunlearning
closed
3 weeks ago
5
writing bpcells matrices to Zarr stores
#139
Artur-man
opened
1 month ago
8
Reading BPcells matrices with other hdf5 readers
#138
Artur-man
closed
1 month ago
2
[r] sklearn/LSI interface design docs
#137
immanuelazn
opened
1 month ago
0
Installation error
#136
gevro
closed
1 month ago
4
rowSums is slower for smaller matrix
#135
buutrg
closed
1 month ago
2
Ia/insertion radix sorting
#134
immanuelazn
opened
1 month ago
1
Issue when installing BPCells inside docker container
#133
oliviaellis65
closed
1 month ago
3
installation issues related to C++17
#132
BoxWong
opened
1 month ago
5
Performance fix for BP-128 kernels
#131
bnprks
closed
1 month ago
2
problem with BPCells and PCA/Dim Reductions
#130
fingeram
closed
1 month ago
9
as.matrix() error when transfering big matrix
#129
littlemingone
opened
2 months ago
3
[r][cpp] add pseudobulking to matrices
#128
immanuelazn
closed
1 month ago
5
Bump actions/download-artifact from 3 to 4.1.7 in /.github/workflows
#127
dependabot[bot]
closed
2 months ago
1
cannot find hdf5.h when installing into a conda env (windows).
#126
littlemingone
opened
2 months ago
5
BPCells::svds Failing on Large Matrix
#125
Sandman-1
opened
2 months ago
7
enable setting HDF5_CFLAGS and HDF5_LIBS external to ./configure
#124
douglasgscofield
closed
1 month ago
9
[r] Fix Rcpp warning about out-of-bounds access
#123
bnprks
closed
2 months ago
0
findmarkers seurat and bpcells
#122
Flu09
closed
1 month ago
2
Python PyPI deploy setup
#121
bnprks
closed
1 week ago
1
[r] Add randomized test to detect dimnames errors
#120
bnprks
closed
2 months ago
1
[cpp] Add dims check in `build_umap_graph_cpp`
#119
bnprks
closed
3 months ago
0
Macs peak calling
#118
immanuelazn
closed
2 months ago
6
[r] Allow logical mask in select_cells/chromosomes
#117
bnprks
closed
3 months ago
0
[r] Improve trackplot_combine layout logic
#116
bnprks
closed
3 months ago
2
[r] fix trackplot bugs with small tracks/motifs
#115
immanuelazn
closed
3 months ago
1
[r] Fix `trackplot_coverage()` when interacting with single clusters
#114
immanuelazn
closed
3 months ago
1
[r] add peak track plotting
#113
immanuelazn
closed
4 months ago
1
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