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bvalot
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pyMLST
whole genome MLST analysis
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claMLST import relies on deprecated pubMLST API DB list
#34
meg256
opened
1 month ago
8
Clonal Complex and lineage in output
#33
valerievandervorst
opened
2 months ago
1
Cleanup code
#32
bvalot
closed
2 months ago
0
Database/Schema version
#31
marchoeppner
opened
3 months ago
3
claMLST - cannot install Klebsiella pneumoniae
#30
marchoeppner
closed
3 months ago
1
Move to 2.1.6
#29
bvalot
closed
3 months ago
0
Add pasteur repository to classical MLST search
#28
bvalot
closed
3 months ago
0
Import function - Biopython module deprecated
#27
marchoeppner
opened
4 months ago
1
Correct Docs requirement and add pymlst paper
#26
bvalot
closed
4 months ago
0
Switch to direct subprocess for mafft alignment as for blat or kma
#25
bvalot
closed
5 months ago
0
Correct error on KMA search for claMLST from pubMLST
#24
bvalot
closed
5 months ago
0
biopython deprecation warning
#23
ammaraziz
closed
5 months ago
1
Correcting typo in export_res.rst
#22
bajicv
closed
7 months ago
1
Add a batch mode to the dabase import ?
#21
pimarin
opened
7 months ago
6
Add badges to README.md
#20
bvalot
closed
8 months ago
0
Spelling mistake in recombination sub-command
#19
charlie-durant
closed
8 months ago
3
Error: BLAT binary was not found
#18
charlie-durant
closed
8 months ago
2
problem downloading pyMLST
#17
aymericola
closed
8 months ago
1
Mycobacteria cgMLST Typing
#16
mweberr
closed
1 year ago
2
HI, How to work with proteus spp.
#15
suua123
opened
1 year ago
1
got an unexpected keyword argument 'name'
#14
famiji
closed
1 year ago
21
fail to import batabase
#13
famiji
closed
1 year ago
0
Upgrade support python version
#12
dgslos
closed
1 year ago
10
BLAT error
#11
kediza
opened
1 year ago
10
Error: BLAT binary was not found/KMA binary was not found
#10
sunx0766
closed
1 year ago
3
Create a database input example
#9
sunx0766
closed
1 year ago
2
SQL error on import
#8
oliverdrechsel
opened
1 year ago
3
Can't find allele
#7
MMAThijssen
opened
1 year ago
5
query with in parallel?
#6
lskatz
closed
2 years ago
2
Possible name collission
#5
lskatz
opened
2 years ago
2
MLST import or create documentation
#4
lskatz
closed
2 years ago
14
multi-fasta file for scheme creation
#3
215220606
closed
2 years ago
3
Python3 fix
#2
sladinji
closed
4 years ago
1
Can't find the last locus in sheme
#1
Dong-Ning
closed
2 years ago
4