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workflow-coastal-hydrowaq
Porting and deploying the HiSea use case on C-SCALE
Apache License 2.0
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Test udocker with Deltares container
#58
sebastian-luna-valero
closed
1 year ago
1
Test udocker with Deltares container
#57
sebastian-luna-valero
closed
1 year ago
1
Test udocker with Deltares container
#56
sebastian-luna-valero
opened
1 year ago
1
CMEMS changed their data products
#55
backeb
opened
1 year ago
0
adapt workflow for HPC using udocker / singularity
#54
backeb
opened
1 year ago
4
delft3dfm WARNINGS
#53
backeb
opened
1 year ago
6
Proof of concept to work with udocker
#52
sebastian-luna-valero
opened
1 year ago
0
Snakefile python2docker
#51
backeb
closed
1 year ago
0
Register research object in Rohub
#50
backeb
closed
1 year ago
2
Set up cronjob to run snakemake workflow daily
#49
backeb
opened
1 year ago
0
Proof of concept to work with udocker and snakemake
#48
sebastian-luna-valero
closed
1 year ago
1
notebook with example visuals: docker build failed on dfm_tools pip install
#47
backeb
opened
1 year ago
3
Testing ghcr.io
#46
sebastian-luna-valero
opened
1 year ago
4
Fix postprocessing
#45
backeb
closed
1 year ago
2
update post processing to read the reftime from the .mdu. This was already implemented the boundary.py
#44
backeb
closed
1 year ago
1
create snakemake workflow
#43
backeb
closed
1 year ago
23
Update underlying scripts/workflows
#42
veenstrajelmer
opened
1 year ago
1
Snakemake draft
#41
sebastian-luna-valero
closed
1 year ago
4
Hybrid cloud - HPC workflow
#40
nikosT
opened
1 year ago
30
create scripts to create missing fm_model input files
#39
backeb
opened
1 year ago
0
C-SCALE computing resources: take them or lose them!
#38
sebastian-luna-valero
opened
1 year ago
5
Create LICENSE.md
#37
backeb
closed
1 year ago
0
jupyter notebook environment
#36
backeb
closed
1 year ago
3
HiSea VM down?
#35
backeb
closed
1 year ago
4
Test conda enviroments
#34
sebastian-luna-valero
closed
1 year ago
1
Resources for training
#33
backeb
closed
1 year ago
42
problem with time units encoding when writing netcdf using xarray
#32
backeb
closed
1 year ago
3
download_cmems_physics.py and download_cmems_biogeochemistry.py hang occasionally - reason unclear
#31
backeb
opened
1 year ago
4
Rewrite download_era5.py to deal with CDS limitation
#30
backeb
closed
1 year ago
2
no more space on GRNET VM
#29
backeb
closed
1 year ago
26
motuclient error and file download skipped
#28
backeb
closed
1 year ago
3
update environment.yml
#27
backeb
closed
2 years ago
0
convert download_cmems_*.sh to python command line tools
#26
backeb
closed
2 years ago
0
@lorincmeszaros @avgils configure download script to download to NFS
#25
lorincmeszaros
closed
1 year ago
4
configure container to use the MPI library installed on HPC.
#24
lorincmeszaros
closed
2 years ago
9
Sprint 4: 10-14 Jan 2022
#23
backeb
closed
1 year ago
11
@avgils @lorincmeszaros provide compute and storage requirements for Kubernetes cluster to @sebastian-luna-valero
#22
lorincmeszaros
closed
2 years ago
2
@avgils get familiar with PaaS Orchestrator (https://indigo-paas.cloud.ba.infn.it/home/login). @gdonvito please support.
#21
lorincmeszaros
closed
1 year ago
3
C-SCALE VA Agreement
#20
sebastian-luna-valero
closed
1 year ago
5
Running slurm job in HPC
#19
avgils
closed
2 years ago
4
Terms and conditions for CDS API
#18
sebastian-luna-valero
closed
2 years ago
3
Manage credentials
#17
sebastian-luna-valero
closed
1 year ago
11
Sprint 3: 22-26 November 2021
#16
backeb
closed
2 years ago
6
[WIP] Testing portability
#15
sebastian-luna-valero
closed
1 year ago
0
@lorincmeszaros compare container performance between different set ups (e.g. using MPI library in Singularity container vs using MPI library installed on HPC)
#14
lorincmeszaros
closed
2 years ago
2
Sprint 2: 25-29 October 2021
#13
backeb
closed
2 years ago
9
Sprint 1: 4-8 October 2021
#12
backeb
closed
2 years ago
8
Installing Delft3D FM on GRNETs HPC
#11
backeb
closed
1 year ago
11
Add HiSea members to SRAM CO
#10
sebastian-luna-valero
closed
2 years ago
13
Access to HPC on GRNET
#9
backeb
closed
2 years ago
5
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