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carpentries-incubator
/
cwl-novice-tutorial
Introduction to Workflows with Common Workflow Language
https://carpentries-incubator.github.io/cwl-novice-tutorial/
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Changed workflow and input file names
#108
RenskeW
closed
2 years ago
4
Changed names of input & workflow files
#107
RenskeW
closed
2 years ago
1
Fix code boxes
#106
gcapes
closed
9 months ago
2
Ep04: Second exercise depends on missing step
#105
gcapes
closed
2 years ago
0
More clearly separate the two index options
#104
gcapes
closed
2 years ago
1
Fix rendering of link in keypoints
#103
gcapes
closed
2 years ago
1
Correct the file path
#102
gcapes
closed
2 years ago
1
Ep03: Multi-step workflow doesn't extend previous example
#101
gcapes
closed
2 years ago
4
Fix typo
#100
gcapes
closed
2 years ago
1
Is index in addition to rnaseq files?
#99
gcapes
closed
2 years ago
1
Fix typo
#98
gcapes
closed
2 years ago
2
bonus material: running novice examples on remote system
#97
mr-c
opened
2 years ago
0
Better explain how to increase docker/wsl2 memory
#96
mr-c
closed
2 years ago
1
Docker requirements for setup process
#95
douglowe
closed
2 years ago
1
Improvements and bugs during pilot workshop
#94
ALuesink
opened
2 years ago
0
star alignment failure (WSL2)
#93
Juami95
opened
2 years ago
1
Fix URLs file format requirement episode 4
#92
AGoetzee
closed
2 years ago
1
Fixed URLs for episode 2
#91
AGoetzee
closed
2 years ago
1
Update figures
#90
ALuesink
closed
2 years ago
0
fixes
#89
mr-c
closed
2 years ago
1
use a smaller dataset
#88
mr-c
closed
2 years ago
7
Mac setup: conda channels
#87
mr-c
closed
2 years ago
1
Tidy setup
#86
gcapes
closed
2 years ago
1
reorganize setup instruction
#85
mr-c
closed
2 years ago
2
code & terminal block should have a copy button
#84
mr-c
opened
2 years ago
0
setup related links should open in a new tab/window
#83
mr-c
opened
2 years ago
5
Separate and expand setup instructions
#82
gcapes
closed
2 years ago
4
expand windows instructions
#81
mr-c
closed
2 years ago
2
macOS specific install instructions
#80
mr-c
closed
2 years ago
0
lesson 2 explain output object and add exercise: renaming workflow output
#79
mr-c
opened
2 years ago
0
Change start of CWL/Shell tool lesson, to include docker
#78
douglowe
opened
2 years ago
1
Computational Workflow justification section added.
#77
douglowe
closed
2 years ago
1
Provide tab error example as download
#76
gcapes
closed
2 years ago
3
can't copy tabs from webpage
#75
mr-c
closed
2 years ago
0
Correct CWL typo and whitespace errors
#74
douglowe
closed
2 years ago
1
Add motivation to introduction
#73
gcapes
opened
2 years ago
5
Review learning objectives
#72
gcapes
closed
2 years ago
2
Use cloned repo
#71
gcapes
closed
2 years ago
2
Tidy up learning objectives
#70
gcapes
closed
2 years ago
1
Outline where exercises should be added
#69
gcapes
opened
2 years ago
0
Update overall learning objectives
#68
gcapes
closed
2 years ago
0
Ep04 ex2: Use featureCounts from bio-cwl-tools downloaded in setup
#67
gcapes
closed
2 years ago
0
No need for 'learning objectives' call out box
#66
gcapes
closed
2 years ago
0
Fix indentation of first example
#65
gcapes
closed
2 years ago
1
Add YAML prerequisite and link to YAML guide
#64
gcapes
closed
2 years ago
1
Add keypoints
#63
gcapes
closed
2 years ago
1
Fix typos
#62
gcapes
closed
2 years ago
1
Setup git repo
#61
gcapes
closed
2 years ago
1
Align comments
#60
gcapes
closed
2 years ago
1
Update link
#59
gcapes
closed
2 years ago
1
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