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chadadavis
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sbglib
Automatically exported from code.google.com/p/sbglib
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Create tag for v2.0.0
#203
GoogleCodeExporter
opened
9 years ago
0
Test for cyclic deps (via Module::Dependency::Grapher)
#202
GoogleCodeExporter
opened
9 years ago
0
SuperpositionIO::pdb
#201
GoogleCodeExporter
opened
9 years ago
0
STAMP: note value of 'seq_id' for merging superpositions
#200
GoogleCodeExporter
opened
9 years ago
0
Cache SearchI results on md5 of sequence
#199
GoogleCodeExporter
opened
9 years ago
0
Guess stoichiometry of complex
#198
GoogleCodeExporter
opened
9 years ago
0
STAMP BLC format to get residue correspondence, not mapping from sequence alignment.
#197
GoogleCodeExporter
closed
9 years ago
1
Refactor: lazy build all of the score fields
#196
GoogleCodeExporter
opened
9 years ago
0
Refactor: Complex::add_interaction to Assembler::add_interaction
#195
GoogleCodeExporter
opened
9 years ago
0
Wrappers based on MooseX::Role::Cmd
#194
GoogleCodeExporter
opened
9 years ago
2
Bio::DB::ModBASE
#193
GoogleCodeExporter
opened
9 years ago
0
Migrate to Bio::Tools::Run::StandAloneBlastPlus
#192
GoogleCodeExporter
opened
9 years ago
0
Determine symmetry classes
#191
GoogleCodeExporter
opened
9 years ago
1
Refactor Geometric Hash to work on PDLs
#190
GoogleCodeExporter
opened
9 years ago
0
Benchmark interaction scoring methods
#189
GoogleCodeExporter
closed
9 years ago
1
ComplexIO::report should follow PDB format
#188
GoogleCodeExporter
opened
9 years ago
1
Test Geometric Hash approaches
#187
GoogleCodeExporter
opened
9 years ago
0
Seeding breaks when removing edges from interaction network
#186
GoogleCodeExporter
opened
9 years ago
1
Allow multiple seeds, i..e merging sub-complexes
#185
GoogleCodeExporter
opened
9 years ago
1
Upweight interactions used multiple times
#184
GoogleCodeExporter
opened
9 years ago
0
ComplexIO::csv
#183
GoogleCodeExporter
opened
9 years ago
0
InteractionIO::csv Manul input of templates
#182
GoogleCodeExporter
opened
9 years ago
2
Automate feature weighting
#181
GoogleCodeExporter
opened
9 years ago
1
Create experiment record in a transaction
#180
GoogleCodeExporter
opened
9 years ago
2
STAMP Multi protein alignment
#179
GoogleCodeExporter
closed
9 years ago
1
Complex::get_mol_wt() for molecular weight
#178
GoogleCodeExporter
opened
9 years ago
2
BioX::DB::IntAct
#177
GoogleCodeExporter
closed
9 years ago
2
Allow multiple interactions between two components
#176
GoogleCodeExporter
opened
9 years ago
1
Hierarchical seed search
#175
GoogleCodeExporter
opened
9 years ago
1
Hierarchical clash/collision detection
#174
GoogleCodeExporter
opened
9 years ago
5
Optimize for symmetry when Internal homologies exist
#173
GoogleCodeExporter
opened
9 years ago
5
BioX::Tools::Run::Interprets
#172
GoogleCodeExporter
opened
9 years ago
2
BioX::Tools::Run::Modeller
#171
GoogleCodeExporter
opened
9 years ago
1
Refactor Parallel::PBS
#170
GoogleCodeExporter
opened
9 years ago
2
PBS from mod_perl
#169
GoogleCodeExporter
opened
9 years ago
1
Tests for changes to PDL::IO::Storable
#168
GoogleCodeExporter
closed
9 years ago
1
structures from WWW::PDB
#167
GoogleCodeExporter
closed
9 years ago
2
structures from WWW::PDB
#166
GoogleCodeExporter
opened
9 years ago
3
Model and Target should be subclasses of Complex
#165
GoogleCodeExporter
opened
9 years ago
0
Move Bio:: to BioX:: to identify them as extensions of Bioperl
#164
GoogleCodeExporter
opened
9 years ago
1
Module: Bio::DB::PDB
#163
GoogleCodeExporter
closed
9 years ago
4
Bio::Structure::Align::
#162
GoogleCodeExporter
opened
9 years ago
3
Module: Domain annotation: Bio::DB::Pfam
#161
GoogleCodeExporter
opened
9 years ago
1
Module: Domain annotation: Bio::DB:CDD
#160
GoogleCodeExporter
opened
9 years ago
1
Module: Domain annotation: Bio::DB::HMMER
#159
GoogleCodeExporter
opened
9 years ago
2
Module: Bio::DB::Interaction::BISC
#158
GoogleCodeExporter
opened
9 years ago
1
Geometric Hash: undefined basis errors
#157
GoogleCodeExporter
opened
9 years ago
2
fasta2net : make network partitions non-redundant
#156
GoogleCodeExporter
opened
9 years ago
0
PairedBlast looses some templates
#155
GoogleCodeExporter
opened
9 years ago
2
mndoms bug causing Complex.t to fail
#154
GoogleCodeExporter
closed
9 years ago
2
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