cidgoh VIRUS-MVP issues

cidgoh / VIRUS-MVP

VirusMVP is an interactive heatmap-centric app that integrates viral genomic mutations, lineage information and curated functional impact to study the spread and evolution of viruses in Canada and globally.

https://virusmvp.org/

MIT License

5 stars 2 forks source link

issues

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Newest Most commented Recently updated Oldest Least commented Least recently updated

Parse n/a fn vals in gvf

#213 ivansg44 closed 5 days ago
0
All mutations showing thick border

#212 ivansg44 closed 5 days ago
0
Further test strain order functionality

#211 ivansg44 opened 2 weeks ago
0
Stop hidden strains from defaulting when none hidden

#210 ivansg44 closed 2 weeks ago
0
Unhiding all group reverts to default hidden groups

#209 ivansg44 closed 2 weeks ago
0
Change select groups modal loading behaviour

#208 ivansg44 closed 2 weeks ago
2
Docker socket proxy

#207 ivansg44 opened 4 weeks ago
1
Improved docker image

#206 ivansg44 closed 3 weeks ago
1
Filter form

#205 ivansg44 opened 1 month ago
0
Strain order not updating as expected

#204 anwarMZ opened 1 month ago
8
script for setting default view doesn't work in its current structure on production instance

#203 anwarMZ opened 1 month ago
1
More minimalist docker container

#202 ivansg44 closed 3 weeks ago
1
Singularity branch

#201 ivansg44 opened 2 months ago
1
Clicking "OK" in select lineages modal always reloads data

#200 ivansg44 opened 2 months ago
0
Surface level vocabulary generalization

#199 ivansg44 closed 2 months ago
0
Superior 4k resolution

#198 ivansg44 opened 2 months ago
0
Allow users to select profile when uploading files

#197 ivansg44 opened 2 months ago
1
Update the user uploaded file validation step by adding these extensions

#196 anwarMZ closed 2 months ago
0
Process new gvf format

#195 ivansg44 closed 2 months ago
0
Fetch latest resources for defaults generator

#194 ivansg44 closed 3 months ago
0
Display top 100 lineages by default

#193 ivansg44 closed 3 months ago
0
Fetch latest resources for default generator script

#192 ivansg44 closed 3 months ago
0
Incorporate non-SARS-CoV-2 datasets into repo

#191 ivansg44 opened 3 months ago
0
Display top 100 lineages by default

#190 ivansg44 closed 3 months ago
0
Become VIRUS-MVP

#189 ivansg44 closed 3 months ago
2
Replace references to lineages/variants with more generic vocabulary

#188 anwarMZ opened 4 months ago
1
Lazy loading

#187 ivansg44 opened 8 months ago
0
Portability for small viewports

#186 ivansg44 opened 8 months ago
0
Virus MVP branding

#185 ivansg44 closed 3 months ago
0
Visualize segmented genomes

#184 ivansg44 opened 8 months ago
0
Read nf-ncov-voc JSON file

#183 ivansg44 closed 3 months ago
1
NSP bar fig update callback

#182 ivansg44 closed 8 months ago
0
No nsp bar fig update callback

#181 ivansg44 closed 8 months ago
1
a few SARS-CoV-2 specifics hard coded in data_parser.py

#180 anwarMZ closed 9 months ago
1
Force heatmap tick angles to 90

#179 ivansg44 closed 9 months ago
0
Scroll heatmap to S gene on page launch

#178 ivansg44 closed 9 months ago
0
Select groups modal loads slowly for large datasets

#177 ivansg44 closed 2 weeks ago
3
Add a toggle to switch between two groupings.

#176 anwarMZ opened 10 months ago
0
nf-ncov-voc naming convention change

#175 ivansg44 closed 2 months ago
0
Make the default view to start from spike protein

#174 anwarMZ closed 9 months ago
1
Add an option to freeze rows as reference

#173 anwarMZ opened 10 months ago
0
Demo datasets

#172 ivansg44 opened 11 months ago
0
Option to view hidden lineages with mutation after jumping to mutation

#171 ivansg44 opened 11 months ago
1
Issues with generalizing to other viruses

#170 ivansg44 closed 3 months ago
0
Data update and other features

#169 ivansg44 closed 11 months ago
0
Encode hetero mutations at specific pos w/in cols

#168 ivansg44 closed 12 months ago
0
Encode mutations at consistent positions in cols

#167 ivansg44 closed 12 months ago
0
Smaller set of default lineages shown on launch

#166 ivansg44 closed 11 months ago
0
Publication status classification / ontology for virological.

#165 fionabrinkman opened 1 year ago
0
Reduce number of default visualized lineages

#164 ivansg44 closed 1 year ago
0